Protein

View in Explore
Genbank accession
QIG77829.1 [GenBank]
Protein name
PAAR repeat-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPGAARLADICTGHGCWPPRANSSASSDVFINGRGAHRQGDTWLPHTCPDIPETHASVLASGSSTVYTNGKQQGRIGDPVACGSTVATGSGNVIVGG
Physico‐chemical
properties
protein length:97 AA
molecular weight: 9772,69360 Da
isoelectric point:6,87731
aromaticity:0,04124
hydropathy:-0,23299

Domains

Domains [InterPro]
cd14737
STR
2–96
cd14737
G3DSA:2.60.200.60
STR
3–95
G3DSA:2.60.200.60
IPR008727
STR
24–87
IPR008727
QIG77829.1
1 97
Architecture
STR
STR 2-96 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG77829.1
1 97
Domain Start End Length (AA) Confidence
N-terminal 1 92 92 0,3365
Central domain 93 92 1 0,0491
C-terminal 93 97 4 0,8568
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-92
Central
93-92
C-terminal
93-97

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM61
[NCBI] 		2509572 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG77829.1 [NCBI]
Genbank nucleotide accession
MN988561 [NCBI]
CDS location
range 102893 -> 103186
strand +
CDS
ATGCCAGGAGCAGCACGCTTAGCTGATATATGTACAGGACATGGATGTTGGCCACCTAGAGCTAATTCGAGTGCATCTTCAGATGTATTCATAAATGGTCGAGGAGCTCATCGTCAAGGTGATACATGGTTACCTCATACATGTCCTGATATACCTGAAACTCATGCATCTGTATTAGCATCAGGGTCAAGTACCGTTTATACTAACGGTAAACAACAAGGTCGAATAGGAGATCCAGTAGCTTGTGGAAGTACTGTAGCTACAGGATCTGGTAATGTCATAGTCGGTGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2266b828b0ce65f3f1720c3cbcb274f2b65c5c9e8875c5fde85588fdab57fdcf
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9562
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank