Protein

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Genbank accession
AMM43709.1 [GenBank]
Protein name
structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,51
Protein sequence
MLPFSPLIVYGNKIAPYQILYEMKQTAATQTLSYTITEDVKIVHVCIVGHGAASGGGLSYRNNIPVQVGDVFTINFSATGANSVYKNGSELICVANSGSLWSGSSNIAYGGNGGKNANIINDGGGNGGTATQGGSRNSIKVLGGAGGYSGSGGNGDLGSTQKNWYGAPDPNSGAGAGGVRRFSSSGGQALGGNVGLRGKTNTPTGSSSASADVTYNGENGSVSGGILCGGGVNSTTSNFNAGVVIQTGKNSEYK
Physico‐chemical
properties
protein length:254 AA
molecular weight: 25211,30570 Da
isoelectric point:8,92682
aromaticity:0,07087
hydropathy:-0,22717

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage vB_PcaM_CBB
[NCBI] 		2772511 Uroviricota > Caudoviricetes > Mimasvirus >
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AMM43709.1 [NCBI]
Genbank nucleotide accession
KU574722 [NCBI]
CDS location
range 75120 -> 75884
strand +
CDS
ATGTTACCGTTCAGTCCTTTGATTGTTTATGGAAATAAAATAGCACCTTATCAGATATTATATGAAATGAAACAAACTGCTGCTACACAAACGTTAAGTTATACAATAACGGAAGATGTTAAAATTGTCCATGTTTGTATTGTAGGACATGGTGCGGCATCAGGTGGTGGTCTATCTTATAGAAACAATATACCAGTTCAAGTAGGAGATGTATTCACCATAAACTTCAGTGCTACTGGTGCAAATTCAGTTTATAAAAATGGTTCTGAACTAATATGTGTTGCGAATAGTGGATCACTGTGGTCAGGAAGCAGCAACATTGCCTATGGCGGTAATGGTGGTAAAAATGCTAACATTATTAATGATGGTGGTGGTAACGGTGGTACAGCCACACAAGGTGGTAGTCGAAATTCAATAAAAGTACTTGGTGGTGCTGGTGGATATTCAGGTTCTGGTGGTAATGGTGATTTAGGATCAACTCAAAAGAATTGGTACGGTGCACCAGATCCAAATTCAGGTGCGGGGGCTGGGGGTGTACGTAGATTTTCATCATCTGGCGGTCAGGCACTTGGCGGGAATGTTGGTCTTCGTGGAAAAACAAATACTCCTACAGGAAGCTCATCTGCATCAGCAGATGTTACATATAATGGTGAAAATGGTTCTGTATCAGGAGGCATTCTTTGTGGTGGTGGTGTAAACTCAACGACTTCAAATTTCAATGCAGGAGTAGTTATACAAACTGGTAAAAATAGTGAATACAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ea182c622a0791e4e43bc16c462f9affaf6b3e241572f81d61dbf09db0065b73
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4894
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Things Are Getting Hairy: Enterobacteria Bacteriophage vB_PcaM_CBB Buttimer,C., Hendrix,H., Oliveira,H., Casey,A., Neve,H., McAuliffe,O., Ross,R.P., Hill,C., Noben,J.P., O'Mahony,J., Lavigne,R. and Coffey,A. 2017 28174560 GenBank