Protein

View in Explore
Genbank accession
YP_010113358.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,70
Protein sequence
MTNLNIAIPADSKDTEFGTSDILLAKDIVAYLNALDSDISKELTAQTDKINKINESIKQLIDHNLIKIVTELPTTDIDKNCIYLVPNKDGDGNNVFVEYIYVESKNTFEEVGRIQAKVDLSDYYTKEETDNLILIAKNSAINIHNEDDARSIKLDINDTGVEEEHGSTVNVSLIDDSLNYISNINAYSGFSHYDDNGGYGNFCSERLYIYSKTHDTTINSDMMDIYNPTIGGNIRITVDKKLTEEEQLVEDSPIDISLIDVNCSADINANRLIYKRPNSSISQLGSAELDIQDSSYQTSVTSTGLSAYFFNDSDDLELGIDVRHDNDKNALFLGNDYEVGISRIIDNTEGATIIGVKSITAFSNPSATKVWATDGSTVDLSTKANASDLNTKANKSDILLKKSASGGYYVEANSNALGFKAFAVNPNCNASGSYSFAEGCTTTANGAYSHVEGEYTSTYGSYSHSEGFGSLSIGEASHAEGKLTKASGYCSHALGICNVINKNAIHSVGIGDDTTNKNAEYIYAKNDTNSTSLVNDPKNGYKYLIGVGGYDGISTDNTTYKSVQEVIADLTARIEQLETKVRTLEAANTPA
Physico‐chemical
properties
protein length:591 AA
molecular weight: 64159,63860 Da
isoelectric point:4,49678
aromaticity:0,07614
hydropathy:-0,39848

Domains

Domains [InterPro]
DC_1557
STR
268–584
DC_1557
IPR011049
STR
401–540
IPR011049 Coil
IPR011049
STR
413–528
IPR011049
YP_010113358.1
1 591
Architecture
STR
STR 268-584 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010113358.1
1 591
Domain Start End Length (AA) Confidence
N-terminal 1 445 445 0,3444
Central domain 446 580 136 0,4187
C-terminal 581 591 10 0,9977
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-445
Central
446-580
C-terminal
581-591

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured phage cr131_1
[NCBI] 		2772093 Uroviricota > Caudoviricetes > Crassvirales > Oafivirinae > Cacepaovirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010113358.1 [NCBI]
Genbank nucleotide accession
NC_055902 [NCBI]
CDS location
range 11439 -> 13214
strand +
CDS
ATGACTAATCTTAATATTGCTATTCCGGCCGATAGCAAAGATACTGAGTTTGGTACATCTGATATATTGCTTGCTAAAGACATTGTGGCATATCTGAATGCACTGGATTCGGATATATCTAAAGAGCTTACTGCTCAAACTGATAAGATTAATAAGATTAATGAGTCTATTAAACAGCTTATAGATCATAACTTGATTAAGATAGTTACAGAGCTTCCTACTACAGATATAGATAAGAACTGTATATATCTTGTACCGAATAAAGATGGTGACGGCAATAATGTATTCGTTGAGTATATCTATGTAGAATCAAAGAACACCTTTGAGGAAGTAGGTAGAATACAGGCTAAAGTAGATTTGTCAGACTACTATACTAAAGAAGAAACTGATAATTAGATATAGATAGCAAAGAATAGTGCTATTAATATACATAATGAAGACGATGCCAGATCTATAAAACTAGATATCAATGATACTGGAGTTGAAGAGGAACATGGTAGTACGGTAAATGTATCTTTAATTGACGACAGTTAGAACTATATTTCTAATATTAATGCTTATAGTGGTTTTAGCCATTATGATGACAACGGAGGTTATGGTAATTTTTGTAGTGAGCGTCTGTATATTTACAGCAAAACCCATGATACTACCATAAATTCCGATATGATGGATATATATAACCCTACTATTGGTGGTAATATTAGAATAACTGTCGATAAAAAACTTACAGAGGAGGAACAATAGGTTGAGGATTCTCCAATAGATATATCTTTAATTGATGTTAATTGTAGTGCCGATATTAATGCTAATAGACTTATCTATAAGAGGCCAAATAGCAGTATTAGTCAACTTGGTTCTGCAGAATTAGACATACAAGATAGTTCATATCAAACCTCAGTAACTAGTACAGGTTTAAGTGCTTATTTTTTTAACGATAGTGACGATCTTGAGTTAGGTATAGATGTAAGACACGATAATGATAAAAATGCACTATTTCTTGGAAATGATTATGAGGTTGGTATATCTCGTATTATAGATAACACTGAAGGAGCTACTATAATAGGCGTTAAGAGTATAACAGCTTTCTCCAATCCCTCTGCTACTAAAGTATGGGCTACAGATGGTTCTACTGTAGATTTATCTACTAAGGCTAATGCTTCTGATTTAAATACTAAAGCTAATAAGTCTGATATATTGTTAAAGAAAAGTGCTAGTGGTGGTTATTATGTTGAAGCTAATAGTAATGCATTAGGATTTAAAGCTTTTGCTGTTAATCCTAATTGTAATGCTAGTGGCAGTTACTCATTTGCTGAAGGATGTACTACAACAGCTAATGGCGCTTATTCTCACGTTGAAGGAGAATATACGTCAACATATGGATCATATTCTCATTCTGAAGGATTTGGTTCATAGAGCATTGGAGAAGCATCTCATGCGGAAGGGAAACTTACAAAAGCTAGCGGGTATTGTTCTCACGCTTAGGGTATATGTAACGTTATTAACAAAAATGCTATTCATTCAGTCGGTATAGGTGATGATACAACTAATAAAAATGCTGAATACATTTATGCTAAAAATGACACGAATAGTACATCGCTAGTTAATGATCCAAAGAATGGCTATAAATACCTTATCGGAGTAGGCGGCTATGATGGCATAAGTACAGATAATACTACTTACAAATCAGTTCAAGAAGTAATAGCAGATCTAACAGCGCGTATTGAACAATTAGAAACTAAAGTGAGAACTCTTGAAGCTGCTAATACTCCTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2651193e7fcd59e232b0a6269abed449914a52fcd44b7b8a0379ece5de1cb560
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6363
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Taxonomic proposal: Crassvirales, a new order of highly abundant and diverse bacterial viruses Shkoporov,A.N., Stockdale,S.R., Guerin,E., Ross,R.P. and Hill,C. 2023-03-24 — GenBank