Protein

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Genbank accession
YP_007348941.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSIVTLFTKTAPTLGGYAFDATLEDTLEISVDLAEYPIETGAKITDHRIINPMRWYLTGAVSDNPLIPTLTDFVGGAVSNLTKNPWVAGVAGLSAGWLSGTQQTRSSSALEMLINLAYAGEPFDINAGDIYLKNMGILRISRTKDPENEAGLIFVAELREVITLSRLPLLGQPSQYQLPTDDPAQSGAAALIKKGQQAGKAVGDAVNKSVNAVLDGLFT
Physico‐chemical
properties
protein length:219 AA
molecular weight: 23280,23170 Da
isoelectric point:4,69885
aromaticity:0,06849
hydropathy:0,06256

Domains

Domains [InterPro]
DC_0601
STR
1–219
DC_0601
IPR048494
ATT
19–163
IPR048494
YP_007348941.1
1 219
Architecture
STR
ATT
STR
STR 1-18 | ATT 19-163 | STR 164-219
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Edwardsiella phage MSW-3
[NCBI] 		1264700 Uroviricota > Caudoviricetes > Yokohamavirus >
Host Edwardsiella tarda
[NCBI] 		636 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007348941.1 [NCBI]
Genbank nucleotide accession
NC_020082.1 [NCBI]
CDS location
range 17555 -> 18214
strand +
CDS
ATGTCAATCGTAACTCTCTTTACTAAAACCGCCCCGACGTTGGGCGGTTACGCGTTCGATGCGACGCTGGAGGACACGTTAGAAATCAGCGTGGATTTGGCGGAATATCCAATTGAGACAGGCGCTAAAATCACTGACCACCGTATCATCAATCCGATGCGATGGTATCTCACCGGCGCGGTCAGTGATAACCCGCTGATTCCTACCCTGACCGATTTCGTCGGTGGAGCTGTCTCCAACCTCACAAAGAACCCGTGGGTCGCCGGTGTAGCGGGACTGTCGGCCGGCTGGTTGTCCGGCACGCAACAAACTCGATCTTCTTCTGCGTTGGAGATGTTGATTAACCTAGCGTACGCCGGGGAGCCGTTCGACATTAACGCCGGTGACATATACCTTAAAAACATGGGCATTCTACGCATCAGCCGCACCAAAGACCCCGAGAATGAAGCGGGGTTGATATTCGTCGCGGAGTTGCGCGAGGTCATCACGCTGTCTCGTCTCCCGTTATTGGGTCAGCCGTCACAATACCAGTTGCCAACGGATGACCCGGCACAGTCCGGTGCAGCGGCGTTAATCAAGAAGGGGCAGCAAGCGGGTAAAGCTGTCGGGGACGCTGTCAATAAATCGGTCAACGCTGTTCTGGATGGGCTATTCACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b0a9f1f9e4eea44d777df66a030978215643d37d0c550e80175bca44a819d554
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7806
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of a Novel Myovirus Which Infects Atypical Strains of Edwardsiella tarda Yasuike,M., Sugaya,E., Nakamura,Y., Shigenobu,Y., Kawato,Y., Kai,W., Nagai,S., Fujiwara,A., Sano,M., Kobayashi,T. and Nakai,T. 2013 23469359 GenBank