Protein

View in Explore
UniProt accession
A0A8S5LXI8 [UniProt]
Protein name
SHIRT domain
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,89
Protein sequence
LSITGGTIKGNNGAHGGGIFIQESTSETKIENVTFMRNQAKYGGGVYLHKNAGINVSNSTFSNNFAIQGGAIYTGNSDYDNPADTGKYQTVKLAGDVSFENNSASYGLYTPPENADEFTNLKFSKSSVTGKNIFPVDSLLTNYDINYINGDKIDPTEKYQIRFEFKSTTSERDLPSDILDLLPDPIIGIKKGDKVTLPIFADSEIKVEDGKWVFTGWKDGTEIVVNDNILVVGEWKFCPNMSVINNVPTISANDVTLNVDDNFDPLLDVSATDKEDGDITLTKDNIIANDVDTSKAGIYHVTYKVTDKNGASAEKTITVTVEQKTTNKPQQPQKPNKPNNTTKPDKQSKSPKTGDMSNISLFAFMFAGSSGALAVLFGKKRKRNKNA
Physico‐chemical
properties
protein length:387 AA
molecular weight: 42151,43590 Da
isoelectric point:5,32038
aromaticity:0,08527
hydropathy:-0,53411

Domains

Domains [InterPro]
IPR011050
STR
3–135
IPR011050 IPR041030 IPR013783 TIGR01167
PTHR11319
Unmapped
8–142
PTHR11319 IPR041030 IPR013783 IPR017502
IPR003368
Unmapped
58–74
IPR003368 IPR032179
IPR003368
Unmapped
60–75
IPR003368 cd00146
A0A8S5LXI8
1 387
Architecture
STR
STR
STR 3-135 | STR 157-322 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5LXI8
1 387
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0118
Central domain 11 203 194 0,8599
C-terminal 204 387 183 0,1852
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-203
C-terminal
204-387

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctOOe6
[NCBI] 		2826309 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD74684.1 [NCBI]
Genbank nucleotide accession
BK014763 [NCBI]
CDS location
range 1 -> 1164
strand +
CDS
CTTTCTATAACAGGTGGAACGATTAAGGGAAATAATGGAGCGCATGGCGGTGGTATTTTCATTCAAGAAAGTACATCAGAAACTAAGATTGAAAATGTCACATTTATGAGAAATCAAGCTAAATATGGTGGAGGAGTATACCTACACAAGAATGCAGGAATAAATGTAAGTAACAGTACATTTTCCAATAATTTTGCAATACAAGGCGGTGCAATTTATACTGGAAATTCTGATTATGACAATCCGGCGGATACAGGTAAATATCAGACTGTTAAACTTGCAGGTGATGTGAGCTTCGAAAACAACTCTGCTTCATATGGACTTTACACTCCGCCTGAAAATGCAGATGAATTTACGAATCTTAAATTTTCGAAATCATCTGTGACAGGTAAAAATATCTTTCCTGTGGATTCACTTTTGACAAACTATGATATTAACTATATCAATGGGGATAAGATTGATCCAACTGAAAAGTATCAAATTCGTTTTGAGTTTAAAAGCACAACCTCAGAAAGAGATTTACCAAGCGATATATTGGATTTGCTTCCAGACCCAATAATTGGCATTAAAAAAGGCGATAAAGTAACTTTACCTATTTTTGCTGATTCTGAAATCAAGGTAGAAGATGGAAAGTGGGTATTCACAGGCTGGAAAGACGGAACAGAAATAGTAGTTAATGACAATATATTGGTGGTTGGTGAATGGAAGTTTTGCCCAAATATGAGTGTTATCAATAATGTGCCTACGATTTCAGCAAATGATGTTACATTGAATGTAGACGATAATTTCGACCCATTGTTAGACGTTAGTGCAACGGACAAAGAAGATGGCGATATTACGCTGACAAAGGATAATATTATTGCGAATGATGTAGATACTTCTAAAGCTGGTATTTATCATGTGACATATAAAGTAACTGACAAAAACGGAGCTTCTGCTGAAAAAACAATTACTGTTACAGTGGAACAAAAAACTACTAACAAACCACAACAGCCACAGAAGCCAAATAAGCCAAACAATACAACAAAGCCTGATAAACAGTCCAAAAGTCCAAAAACAGGTGATATGTCAAATATAAGTTTATTTGCTTTTATGTTTGCTGGCTCAAGTGGTGCATTAGCTGTTTTATTTGGTAAAAAGCGTAAAAGAAATAAAAATGCTTAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0005576 extracellular region Cellular Component IEA:UniProtKB-SubCell (UniProt)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
c4eed7bad0f980d45b19e38ecc39a2389c933b40344168dd32f8fde4749232ef
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7122
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50