Protein

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Genbank accession
QGT52874.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
Protein sequence
MTFSVNYNGVELSELVSGFTAIDRGFGSVWNNTLSNQVARYGQSFVKNTLSAKEITITIRKSGIPSDWIALRKELAKVLDVNEPAPLIFGDEPNKVWYAVADGTQALSEDISNLVATGTLTFIVPEGHAYSTYTNVLNSDNSGGVNGSITPNADGSVDITINNQGTLPTWIDLKLTNNHDNGYFGIAGVNGSLELGNREEVDGVTIKHSDILYDSKTDPKFSKFVSAAGQPHPEWTGAGTNGTIGYQEYNYKSSNGQQKTMKGVKLINPGSQTGFRGGMAELVLPPDSNGDSGAVNFYAWFRLFTWTTVLGQTGVMQILFTDENDEFVAGYGTLKDDKTGNIGTVGFWIGGPNKGQWKHIPYVANNGEQTGLKDNNTMLNDNRGALDFFKQGSTLGFYWKGGHQRIVVPELKDVAIHKVKFFFGNWSTNPRGTMTHMVIRDFWCRKDFVNTWNDLPNRYKNGSVVEIDMASGNVSKDGISAITEVVNGTEPFNIPPGISQIKIIQSSWNNTPPDVEISWKERIL
Physico‐chemical
properties
protein length:524 AA
molecular weight: 57446,43820 Da
isoelectric point:5,39706
aromaticity:0,10496
hydropathy:-0,37061

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–130
G3DSA:2.40.30.200
DC_0420
STR
1–524
DC_0420
IPR006520
Unmapped
5–130
IPR006520
IPR008841
STR
34–124
IPR008841
QGT52874.1
1 524
Architecture
ATT
STR
ATT 1-130 | STR 131-524
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGT52874.1
1 524
Domain Start End Length (AA) Confidence
N-terminal 1 271 271 0,7427
Central domain 272 470 200 0,0486
C-terminal 471 524 53 0,0922
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-271
Central
272-470
C-terminal
471-524

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactococcus phage CHPC148
[NCBI] 		2675248 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactococcus lactis
[NCBI] 		1358 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGT52874.1 [NCBI]
Genbank nucleotide accession
MN689516 [NCBI]
CDS location
range 14378 -> 15952
strand +
CDS
ATGACATTTTCAGTTAATTACAATGGTGTTGAACTATCTGAATTAGTAAGTGGATTCACAGCAATTGATAGAGGGTTTGGTTCAGTTTGGAATAATACACTATCAAATCAAGTAGCTAGATATGGTCAATCATTTGTAAAGAATACATTAAGCGCAAAAGAAATTACTATTACCATTAGAAAAAGCGGAATTCCAAGTGATTGGATAGCCTTAAGAAAAGAATTAGCAAAGGTGCTGGACGTCAATGAACCAGCGCCTTTAATTTTTGGTGATGAGCCTAATAAAGTTTGGTATGCAGTAGCAGATGGAACTCAAGCCTTATCAGAAGATATCTCTAACTTAGTTGCTACTGGAACTCTTACATTTATAGTCCCAGAAGGGCACGCTTATTCGACATATACTAATGTTTTAAACTCAGATAATTCAGGTGGAGTCAATGGTTCTATCACTCCTAATGCTGATGGTTCGGTTGATATCACAATTAATAATCAAGGAACATTACCGACTTGGATTGATTTAAAGCTTACCAATAATCATGACAATGGGTATTTTGGTATTGCTGGGGTTAACGGAAGCTTAGAATTAGGTAATCGAGAAGAAGTTGATGGTGTTACTATCAAGCATAGCGATATTCTTTATGATAGTAAAACTGATCCTAAATTTTCTAAATTTGTATCAGCCGCAGGTCAACCCCATCCAGAATGGACTGGTGCAGGAACAAATGGAACAATTGGGTATCAAGAATATAATTATAAGTCTTCCAATGGGCAACAGAAAACAATGAAGGGTGTTAAGTTGATTAATCCTGGAAGTCAGACAGGTTTTCGTGGAGGCATGGCAGAGCTTGTCTTACCACCAGATTCAAATGGTGATTCTGGTGCAGTTAATTTCTATGCTTGGTTCAGATTATTTACTTGGACAACTGTTCTTGGCCAAACTGGAGTCATGCAAATTCTATTCACTGATGAAAATGATGAGTTTGTGGCTGGTTATGGGACTCTAAAGGATGATAAAACAGGAAATATTGGGACTGTTGGATTTTGGATTGGCGGACCTAACAAAGGGCAATGGAAACATATTCCTTATGTCGCAAATAACGGAGAACAAACTGGGTTAAAAGATAATAATACGATGCTTAATGATAATCGAGGGGCATTGGATTTCTTTAAACAAGGTTCAACTCTTGGTTTTTATTGGAAAGGCGGACATCAGCGCATCGTCGTCCCAGAACTTAAAGATGTCGCAATTCATAAGGTTAAGTTCTTCTTTGGGAACTGGTCAACTAACCCAAGAGGAACGATGACACATATGGTTATTCGTGACTTTTGGTGCCGCAAAGACTTTGTTAATACATGGAATGACTTACCAAATCGCTATAAAAATGGCTCAGTCGTTGAAATTGATATGGCTAGTGGTAATGTATCCAAAGATGGAATATCAGCCATTACAGAGGTAGTAAATGGAACAGAACCTTTCAATATTCCACCTGGAATTAGTCAGATCAAAATCATTCAATCATCTTGGAATAATACACCACCAGACGTTGAAATATCATGGAAAGAAAGGATTTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9b10a7827f6dabf0fe5fb4400a2fb6cb027e4ea4a2ebe7b463be0788851d7b46
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8463
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequences of 31 Lactococcus lactis Bacteriophages Isolated from Foods Marcelli,B., de Jong,A. and Kuipers,O.P. — — GenBank