Protein

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Genbank accession
UOX40534.1 [GenBank]
Protein name
baseplate wedge protein
RBP type
TSP
Evidence DepoScope
Probability 0,91
Protein sequence
MELIKIGQVVDDGQGDYLRKGGQKVNKNFTELYDQLGDGDRPFAAGAWKTWTTGILTPKFGESWTVNTTAGSISVNLPKGRPSDYNKTIKLRDVWGTWANQPVILTAASGDTLKGSPTSKNLDKDLMDVELVYCSPGSWEYVENKRVDRITTSDLSTVAKKEILIETNGQTDFPDVFGQTDYNIANTEVYLRGNLLYYGNTLNANSNYGSIDPADPLNVLPLDGRSIRIRGIEILAGDTLTVVTYMDGIASYRSSYNIKNLQIFDTSVSNKTTVNGELWVGDISTKTDFSVEEFGVDPNQRINPNSLEILLNGVLLSRAGSGDLPLFVCEGAIADTQDACWAAAGNWVPALDDYQFVLDDNGNITTIRFGKRFESGDMITVRWFNNDIGTLMDWDGIDGIKDHADKVYLNSEQVVQVSNRIEYSDFDNPSQKTMVPVPGVFNGRIENIQQFFDLVYPIGTIYENANNPANPSTYMGFGIWKRYAEGRLVAGWTSNQADIEFSMNNNDLDVGGNSSNTAGGTYGAKSVELVPQNIPELSSTDKVLVSHPDGNIIIGGCQIDPDASGPGYTKYIESTVAVNKNNTSPANVGILPPIITAYKWVRVG
Physico‐chemical
properties
protein length:604 AA
molecular weight: 66173,93150 Da
isoelectric point:4,52480
aromaticity:0,09437
hydropathy:-0,33593

Domains

Domains [InterPro]
IPR034695
Unmapped
1–604
IPR034695
DC_2238
STR
1–586
DC_2238
IPR036240
STR
2–230
IPR036240 IPR054430 IPR053827
IPR008987
ATT
3–146
IPR008987
G3DSA:1.20.5.960
Unmapped
13–45
G3DSA:1.20.5.960 IPR027411
UOX40534.1
1 604
Architecture
ATT
STR
ATT
ATT 1-146 | STR 147-450 | ATT 451-603 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UOX40534.1
1 604
Domain Start End Length (AA) Confidence
N-terminal 1 317 317 0,9270
Central domain 318 516 200 0,1850
C-terminal 517 604 87 0,9104
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-317
Central
318-516
C-terminal
517-604

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AhFM11
[NCBI] 		2907222 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UOX40534.1 [NCBI]
Genbank nucleotide accession
ON042478 [NCBI]
CDS location
range 132247 -> 134061
strand +
CDS
ATGGAACTGATTAAAATTGGCCAAGTGGTTGACGATGGCCAAGGTGATTACCTCCGTAAAGGTGGTCAAAAGGTAAATAAGAATTTTACTGAACTGTATGATCAATTGGGCGATGGAGATCGCCCTTTTGCTGCAGGCGCGTGGAAAACGTGGACGACTGGTATTTTGACACCGAAATTTGGTGAATCATGGACTGTCAACACAACTGCTGGGTCTATTTCGGTAAACCTTCCTAAAGGTCGTCCGTCCGATTACAACAAAACCATTAAACTTCGTGATGTTTGGGGTACGTGGGCAAATCAACCTGTTATTTTGACTGCTGCATCTGGTGATACTTTGAAAGGCTCACCCACCAGCAAGAATCTTGATAAGGATCTGATGGACGTTGAGCTTGTGTATTGCTCCCCAGGGAGTTGGGAATATGTTGAAAACAAACGTGTTGACCGTATCACCACTTCAGATTTGAGTACAGTAGCTAAAAAGGAAATTCTGATCGAGACTAATGGTCAAACTGATTTCCCGGATGTTTTTGGTCAAACTGATTATAATATTGCAAACACCGAAGTATATCTTCGCGGTAACTTGCTTTATTACGGTAATACATTGAATGCCAACTCAAACTATGGGTCAATAGACCCCGCCGATCCTCTGAATGTTCTTCCTCTTGATGGTCGAAGCATCCGAATTCGTGGTATTGAAATTCTTGCAGGCGATACGTTGACGGTTGTCACATATATGGATGGGATTGCATCATATCGTAGTTCATATAACATTAAAAACCTACAAATTTTTGACACATCTGTATCAAACAAAACTACCGTAAATGGTGAATTGTGGGTTGGTGACATTTCCACTAAAACCGATTTCAGTGTTGAAGAATTTGGAGTTGACCCAAATCAACGAATTAATCCAAACTCTCTTGAGATTTTATTAAACGGTGTTCTTTTAAGTCGCGCAGGTTCTGGTGATTTGCCTTTGTTTGTGTGTGAAGGTGCAATTGCTGATACCCAAGATGCATGTTGGGCTGCTGCTGGTAACTGGGTTCCGGCTCTTGATGATTACCAGTTTGTTTTAGATGACAATGGAAACATTACCACAATTCGATTTGGAAAACGATTTGAAAGTGGTGATATGATTACCGTTCGTTGGTTCAACAACGATATCGGGACTCTGATGGACTGGGATGGTATTGATGGAATTAAAGATCATGCTGACAAGGTTTATCTGAATTCTGAACAGGTTGTCCAAGTTTCAAACAGAATTGAATATTCGGACTTTGATAACCCAAGTCAAAAGACAATGGTTCCGGTTCCTGGTGTTTTCAACGGTCGAATTGAGAATATTCAACAATTCTTTGACCTTGTATACCCGATTGGTACGATTTACGAAAATGCTAATAACCCGGCCAACCCAAGCACTTATATGGGATTTGGGATTTGGAAGCGTTATGCTGAAGGCCGTTTGGTAGCTGGATGGACGTCAAACCAGGCCGACATTGAATTCAGCATGAACAACAACGATTTAGATGTTGGTGGGAATTCAAGCAATACTGCCGGTGGAACATATGGCGCCAAATCTGTTGAACTTGTTCCCCAAAATATACCAGAACTTTCGTCAACAGATAAAGTCTTGGTCAGTCATCCAGATGGAAACATCATTATTGGTGGATGCCAAATTGATCCTGATGCAAGTGGCCCTGGTTATACAAAGTATATTGAATCGACTGTTGCGGTAAATAAAAATAACACTTCTCCGGCAAACGTTGGGATTTTGCCTCCAATTATTACTGCTTACAAATGGGTTAGGGTGGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
81176908c002b5fcb0903bf88e6e09fc1501c238af0b8d5cfd4bd05c21d3e882
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6355
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of lytic bacteriophage (AhFM11) against hypervirulent Aeromonas hydrophila and its genomic analysis Nithin,M.S., Girisha,S.K., Kushala,K.B., Prithvisagar,K.S., Dheeraj,S.B., Krishna Kumar,B. and Suresh,T. 2024-07-23 — GenBank