Protein

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Genbank accession
YP_004063855.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MTTTNTLKHISDKSEYKTFDPTGTSFPPSVTNVQEALGALAPIAIDGFIPESTVAVPGIIRLATEQEVIDGIGNNTAVTPETLKARLNIPTQATETVVGITRYATNAEAIDGTVADAAIVPSSLKASIDNTFNTRTSTEDRNGVIKISTQAAALAGTDDTTAMTPLKVSLAIGAATAALPTYSTATTTVQGIVKIATPAEVQAGAMNNGVAVSPLGLISLTANASRRGLVQLASSAEAITGTDATKAITPQALHAKTGNTGRLGIVKLTTTVGSGDGNTALAYNANVISTTGGTINGTLNVNGTLRRNGQDVVTRNELKDSVPIGTIIMWGGQTGNIPSGWEICDGGNVGDAGFRNVVGSKWGATGNKPDFRGLFPRGSNSSNDGAMKEWETNINIRNAKGNDSKQKPKLGQGVGSYGHGTVQAQQLRFHKHAGGFGEHDNSGAFGNTVRSNYAGTRKGLDWDNRSYFTNEGYEIDGAGSRDSRTTLNSEGLIGNESRPWSMSILFIIKVR
Physico‐chemical
properties
protein length:511 AA
molecular weight: 53167,55690 Da
isoelectric point:7,79121
aromaticity:0,05088
hydropathy:-0,27221

Domains

Domains [InterPro]
DC_0176
STR
1–434
DC_0176
SSF69349
STR
249–334
SSF69349 IPR044916
G3DSA:2.10.280.10
Unmapped
249–286
G3DSA:2.10.280.10 IPR037053 IPR027448
IPR015173
STR
255–310
IPR015173 SSF88874
YP_004063855.1
1 511
Architecture
STR
ATT
STR
STR 1-310 | ATT 311-372 | STR 373-510 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_VR7
[NCBI] 		700939 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Gaprivervirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004063855.1 [NCBI]
Genbank nucleotide accession
NC_014792 [NCBI]
CDS location
range 86175 -> 87710
strand +
CDS
ATGACAACGACTAACACGCTAAAACATATTAGCGATAAATCCGAATATAAAACATTTGACCCGACGGGAACTTCATTTCCTCCGTCAGTAACAAATGTTCAGGAAGCATTGGGGGCTTTGGCTCCTATTGCTATTGATGGATTTATCCCAGAATCTACGGTTGCGGTACCAGGTATTATTCGCCTGGCGACTGAACAAGAAGTTATTGATGGCATAGGCAATAACACAGCAGTAACCCCCGAAACTCTTAAAGCTCGTTTGAATATTCCAACCCAGGCCACAGAGACTGTTGTCGGAATTACCCGTTACGCAACCAATGCAGAAGCTATTGATGGCACAGTAGCCGATGCAGCTATTGTCCCATCAAGCCTTAAAGCTTCTATTGATAATACATTTAATACCCGCACTTCTACAGAAGACCGTAATGGTGTAATTAAGATTTCGACCCAAGCCGCTGCTCTGGCAGGAACGGATGATACAACGGCCATGACTCCTTTGAAGGTTTCATTGGCCATCGGTGCAGCAACTGCAGCTCTTCCAACTTATAGCACAGCAACAACCACTGTACAAGGGATTGTTAAAATTGCAACTCCAGCCGAGGTTCAAGCTGGTGCAATGAATAACGGTGTGGCAGTTTCTCCACTTGGGCTTATTTCATTGACTGCAAATGCCTCCCGCAGAGGGTTGGTCCAATTGGCTTCCAGTGCTGAAGCAATTACAGGTACGGATGCAACAAAAGCAATTACTCCACAAGCTCTACATGCAAAAACTGGTAATACCGGGCGACTCGGCATTGTCAAACTGACAACTACCGTTGGTTCAGGGGATGGTAACACTGCTCTTGCATATAATGCAAACGTAATTTCAACCACTGGCGGTACAATTAATGGAACTCTTAACGTTAATGGAACTTTACGCAGAAATGGTCAGGATGTTGTAACCCGTAACGAACTAAAAGATAGTGTGCCAATCGGAACTATTATTATGTGGGGTGGTCAAACTGGTAATATTCCTTCTGGTTGGGAAATTTGTGACGGCGGTAATGTCGGTGATGCTGGTTTCCGAAATGTCGTTGGTAGTAAATGGGGCGCAACTGGTAATAAGCCAGATTTTCGTGGATTGTTTCCTCGTGGTTCCAACAGCTCTAACGATGGTGCTATGAAGGAATGGGAAACAAACATTAATATAAGAAACGCCAAGGGAAATGATTCCAAACAAAAACCTAAATTGGGTCAAGGTGTTGGTTCATATGGTCACGGTACAGTACAGGCACAACAACTCCGTTTCCACAAGCACGCCGGTGGTTTTGGTGAACATGATAATTCGGGTGCATTTGGTAACACAGTTCGTTCAAACTATGCAGGCACCCGTAAAGGTTTGGACTGGGATAACCGTTCTTATTTTACGAACGAAGGTTATGAAATCGATGGCGCTGGTAGCCGTGATTCTCGAACTACATTAAACAGCGAAGGTCTGATAGGTAATGAAAGCCGCCCATGGTCCATGTCCATTCTTTTTATTATTAAGGTCAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e61174dd9746c0a8615d3c9067025e935b9f127a61560fb3d82240d8efb3920c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6699
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50