Protein

View in Explore
Genbank accession
QOC54629.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,58
Protein sequence
MASTNVAKFTGTLLTTTYPNKYNVVIPPEGPFFRTGLELKNSAGVKLIEGLDYYLGYYYKEAAVAMKDQIYGGVMLINGDTSVDYTIYSIGREYRVPQTEIGKFLVKEDIKDPRNTDWSELMRYAPVVPAIDPPANLDEALLRDEVVKALDDIRQGLIKRAGDMDAAYAEVTDLIFANGKKIFDDNMYSHHRIKNAHQYTADEIGALKVLTKAVDSTKAFGKTLDELVTIMKANGIQQAHIDTLMPVVLGELRGRLKVLNNGALTFRTADSSHVITLQGDKFLITTTRAINITADADSNERGVGVELGSGLNTAYVLNGAVAPIFNGAYLVTPDMVSLYLSEVKLLPGNAYFSPTDTIKVFGTAKQSSPLTMNAQLPTATDKVPGLFAITNLSANISSGTAISQYAVNVLKKTLDDYVDNTYTINGKKFIDDGTKQSLTLTTADLGVGNINNTAPAEKPLTNAIRAVLANKSLSNHTHTFADLTGVPTASDTDAGLLQLWDAIDNTTNKVVTSKQGYNVQQRLNEYKGVLDGLMPSWTTGGAAYGNPGYLPIPAVGNYAGFAKRYSPPQSLGVIKQEADTVYALRNANDGLPNTDHIYYSYAQIDSSGKMVKRQQTSNVYQPAGMSAFPGVQLVAIVVCGEDAIVCLGSDNKYYTVMFDGTLNQKKHLRVWQTTFPTDLPGSGSTFNYTPNQLTDHVVVYKDRVHILRMELSNNYYRTFMLRGTVDTNKVMVFASVALTGGTSRQGVFVNLRQPIDPGSTTVVANGLSTVTAAGLAKWQTRNIAHGPQTHVGAALKNATLRVGVIGTIYLANADGSYPFTVWPTSYVVDMDSFAVTLENPEIFPLKIDVSGVYLATGEELRTKGYQAKWTNGFANNRTHIYPIEDSPYFWTYFDPGDAVTATGISRCKIGDDTRTLFDHLEAHSNYGMNAVDTWSFDGGVGSVLKVGYSGAVYLGNNAYLLAPITEASAVYVEADPDSRYSPDFGGLGPSNVRRAFDLTKYYKLGNMTWCASGSLQNGKPQGAYWTAPGSQNYQAVGDSPTADVLTISQSDWNTLISTIKTQAPSGAANAYASEYINAGADPQFSVWAIRPKDAKPIWLAQVAVKSDRNSSRFVDYYLFQIYPTVTGSTVSFPISTLDLVYGTNIAEPSITAMSITYYHYHTQRYTQPIFYEKGDGTGFLHLPNVYQYNVVGGASSKHFEMVFSLNGSKLVKTNATMLTSAYYYNPTQLTIVGNKLARTNQGFVSAAYLAGPADTPENYMTNGAGWVPTATPFEIVAGVKTAEGWELYITESESLRFGSDYYTLDAYNQNLKTLFPGAYQNRTFYMHAAVVNGQPEYQLLTQKMPDTDTRLFIGTVVTDSQRILSSEFTKVKRLGELKQLTEHTDTVYSHDVNVDSEARLSRLGLLRKQPLSAPAATGDGYLDMSQIGPVFASQSHKVPIELLRDVPVTTLPKDYKKFTMKGANFGQASDVDNGYLVGIPGMSAVVSIAWKMIVEITPSTPTVKIKLKSGYSLGSGTIGCTNANLDVSATFSSALAEATLAAEVGVKNTFVFNGITGGQATAFAAFSVSNVDNGTATVFYISDAATVAIRATTNVQGAAGRITGGVLDVYKVAMPAGVFIDDYFPIVHGDVIFRQPIPMLIADNALYIGNGVNYYGGTVTPSKLTVNLMPKLP
Physico‐chemical
properties
protein length:1673 AA
molecular weight: 181470,79640 Da
isoelectric point:6,02774
aromaticity:0,10161
hydropathy:-0,13192

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QOC54629.1
1 1673
Domain Start End Length (AA) Confidence
N-terminal 1 275 275 0,9855
Central domain 276 490 216 0,2655
C-terminal 491 1673 1182 0,2427
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-275
Central
276-490
C-terminal
491-1673

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage pSal-SNUABM-04
[NCBI] 		2759192 No lineage information
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QOC54629.1 [NCBI]
Genbank nucleotide accession
MT710307 [NCBI]
CDS location
range 141575 -> 146596
strand -
CDS
ATGGCGAGCACGAACGTAGCCAAATTTACCGGTACGCTACTGACGACCACGTATCCGAACAAATACAATGTGGTCATCCCTCCTGAGGGGCCGTTCTTCCGTACCGGGCTTGAGCTGAAAAACAGCGCAGGCGTGAAGCTCATTGAGGGTCTGGATTACTACCTCGGCTACTATTATAAAGAAGCCGCTGTCGCGATGAAAGACCAAATCTACGGCGGGGTCATGTTGATTAACGGGGACACTTCCGTTGACTACACGATCTATTCGATTGGTCGCGAGTACCGCGTACCACAGACCGAGATTGGCAAGTTCTTGGTGAAAGAGGACATCAAAGACCCGCGTAACACCGACTGGTCTGAACTGATGCGTTATGCACCAGTGGTGCCTGCAATTGACCCACCTGCCAACTTAGATGAAGCCCTGCTCCGCGATGAAGTCGTGAAAGCATTGGACGATATTCGCCAGGGTTTGATTAAGCGCGCAGGCGACATGGATGCGGCATACGCCGAAGTCACCGATTTGATTTTTGCCAACGGTAAAAAGATTTTCGACGACAACATGTACAGCCACCATCGTATCAAAAACGCACACCAATACACCGCGGATGAGATTGGGGCGTTAAAGGTATTGACCAAAGCGGTAGACTCGACGAAGGCATTCGGTAAAACGCTGGATGAATTAGTCACTATCATGAAAGCAAACGGCATTCAGCAAGCCCACATTGACACGCTGATGCCTGTGGTGCTTGGTGAACTGCGCGGTCGTCTCAAAGTGCTGAATAACGGTGCGTTGACATTCCGTACCGCCGACTCCAGCCATGTCATTACCCTGCAAGGTGATAAGTTCCTTATTACCACCACCCGTGCTATCAACATCACGGCGGATGCGGACAGTAACGAGCGAGGCGTAGGGGTTGAGTTGGGTTCGGGGCTGAATACGGCCTACGTCCTCAACGGTGCAGTGGCACCTATCTTCAACGGTGCGTATCTGGTCACACCGGATATGGTCTCGTTGTACCTGTCCGAAGTAAAACTCTTGCCGGGGAACGCTTACTTTTCGCCAACCGACACCATCAAGGTGTTCGGTACCGCGAAGCAGTCTTCTCCACTGACCATGAACGCGCAACTGCCGACGGCAACTGACAAAGTACCGGGGTTGTTTGCTATCACCAACCTGTCTGCAAATATTTCTTCCGGTACCGCGATTTCGCAGTATGCTGTTAACGTCCTGAAAAAGACGCTGGATGATTACGTGGACAACACGTACACCATTAACGGGAAGAAGTTCATTGATGACGGCACGAAGCAGTCCCTTACCTTAACGACCGCCGATTTGGGTGTGGGTAACATCAACAATACCGCGCCTGCTGAGAAACCATTGACCAACGCCATTCGTGCGGTACTGGCAAACAAGTCACTGTCCAACCACACACACACCTTTGCTGACTTGACAGGCGTACCAACTGCATCGGATACGGACGCGGGTCTGTTACAGCTGTGGGATGCAATTGATAACACCACGAATAAGGTGGTGACGTCAAAGCAGGGCTACAATGTGCAGCAGCGTCTGAACGAGTACAAAGGGGTGCTGGATGGACTGATGCCGTCGTGGACGACCGGTGGTGCTGCTTATGGTAACCCCGGCTATCTGCCCATCCCGGCTGTTGGTAACTACGCAGGTTTTGCCAAACGATACTCCCCGCCACAGTCCTTGGGTGTGATTAAGCAGGAAGCGGATACGGTGTATGCCTTACGGAACGCCAACGACGGCTTACCGAATACGGACCACATCTATTACTCCTACGCCCAGATTGACAGCTCAGGGAAAATGGTTAAACGCCAACAAACCTCAAACGTCTACCAACCGGCAGGCATGAGTGCGTTCCCTGGGGTGCAACTGGTGGCAATTGTCGTGTGCGGTGAAGACGCGATTGTGTGTTTGGGGTCAGACAACAAATACTACACCGTCATGTTTGACGGAACGCTTAACCAGAAGAAGCACCTGCGTGTCTGGCAAACAACGTTCCCGACCGATTTACCCGGTTCGGGGTCGACGTTTAACTACACACCGAATCAGCTGACGGATCATGTCGTGGTCTACAAAGACCGCGTGCACATCCTGCGCATGGAACTCAGCAACAACTACTACCGCACCTTTATGTTACGGGGTACGGTAGACACCAACAAGGTGATGGTGTTTGCGTCTGTGGCACTGACTGGCGGTACCAGCCGTCAAGGTGTGTTCGTTAACCTGCGCCAACCGATTGACCCCGGCTCAACCACCGTTGTGGCCAACGGTCTGTCGACTGTAACGGCGGCGGGTCTGGCGAAATGGCAGACGCGTAACATTGCACATGGCCCACAAACCCATGTCGGGGCTGCACTGAAAAACGCGACGTTGCGTGTGGGTGTTATCGGGACGATTTACTTGGCGAACGCCGATGGGTCGTATCCGTTTACCGTGTGGCCGACGTCGTATGTGGTGGACATGGACTCGTTTGCAGTCACGCTTGAGAACCCTGAAATCTTCCCGCTGAAGATTGATGTTAGTGGGGTGTATCTGGCAACCGGTGAGGAGCTGCGCACCAAAGGGTACCAAGCAAAATGGACGAACGGGTTTGCCAACAACCGTACGCACATTTACCCCATCGAAGACAGTCCGTATTTCTGGACGTACTTTGACCCAGGCGATGCAGTGACCGCGACCGGGATTTCCCGCTGTAAGATAGGGGACGATACCCGTACGCTGTTTGACCATCTGGAGGCCCATTCCAATTACGGCATGAACGCTGTGGATACGTGGTCGTTTGATGGGGGTGTGGGTTCGGTACTGAAAGTGGGGTACAGTGGTGCGGTATACCTTGGCAACAACGCCTACCTGCTGGCACCGATTACCGAGGCCAGTGCGGTGTATGTCGAGGCTGACCCGGATTCCCGATACTCGCCAGACTTCGGTGGCTTAGGCCCGTCCAACGTTCGGCGTGCGTTTGACCTCACGAAGTATTACAAGCTGGGGAACATGACGTGGTGTGCATCCGGTAGCCTGCAAAACGGGAAACCACAAGGTGCCTATTGGACAGCGCCGGGCAGCCAGAACTATCAGGCTGTGGGTGACAGTCCGACCGCTGACGTGCTGACAATTAGTCAGAGTGACTGGAACACGCTTATCAGCACCATTAAGACACAAGCGCCGTCCGGGGCGGCTAACGCGTACGCGAGCGAATACATCAACGCAGGAGCCGATCCTCAGTTCTCTGTGTGGGCTATTCGTCCGAAAGACGCCAAGCCGATTTGGTTAGCGCAGGTGGCGGTGAAAAGTGACCGTAACAGTAGCCGTTTTGTCGACTACTACCTGTTCCAGATTTACCCTACTGTGACTGGTTCAACGGTATCTTTCCCAATCTCCACTCTGGATTTGGTGTACGGTACCAACATTGCTGAACCGTCCATTACGGCGATGAGTATCACGTACTACCATTACCACACCCAGCGTTACACCCAACCTATCTTCTACGAGAAAGGGGATGGCACAGGCTTCCTGCATTTGCCAAACGTGTATCAGTACAACGTGGTCGGGGGTGCGTCGTCGAAACACTTTGAGATGGTCTTCTCCTTAAACGGGTCGAAGCTCGTCAAAACGAATGCGACGATGTTGACGTCGGCGTATTACTACAATCCGACGCAGTTGACGATTGTCGGTAATAAACTCGCCCGTACGAACCAAGGTTTCGTTTCAGCGGCGTACCTTGCGGGTCCGGCGGATACCCCTGAAAACTACATGACGAACGGTGCGGGTTGGGTACCGACTGCGACACCGTTCGAGATTGTGGCCGGGGTGAAAACGGCAGAAGGGTGGGAGCTGTACATCACCGAGTCTGAAAGCTTACGGTTTGGTTCCGACTATTACACGTTGGATGCGTATAACCAGAACCTCAAAACGTTGTTCCCCGGTGCGTACCAAAACCGTACGTTCTACATGCACGCTGCGGTGGTTAACGGTCAACCGGAATACCAGCTGTTAACGCAGAAAATGCCCGATACAGATACCCGGTTGTTTATCGGTACGGTAGTCACCGACAGTCAACGTATCTTGTCGTCTGAGTTCACGAAAGTGAAACGCTTGGGTGAATTGAAACAGTTGACGGAACACACCGACACGGTCTACAGCCACGATGTGAATGTGGACAGTGAAGCGCGCCTTTCGCGTTTGGGGCTATTGCGCAAGCAACCCCTTTCTGCACCGGCGGCTACCGGTGATGGGTATCTGGATATGTCGCAGATTGGCCCGGTCTTCGCGTCTCAAAGCCACAAGGTTCCCATCGAGTTGCTGCGAGATGTGCCGGTCACTACCTTGCCTAAAGACTACAAGAAGTTCACGATGAAGGGTGCCAACTTTGGTCAGGCTTCTGATGTAGACAATGGGTATTTGGTGGGTATTCCGGGGATGTCGGCTGTCGTCTCGATTGCGTGGAAAATGATTGTGGAGATTACCCCGTCGACCCCGACGGTGAAAATCAAATTGAAGAGTGGCTACTCTTTGGGCTCCGGCACCATCGGATGTACCAACGCCAACCTCGATGTTTCCGCAACGTTTTCTTCTGCACTGGCTGAGGCCACACTTGCTGCCGAGGTGGGGGTCAAAAACACATTCGTGTTTAATGGCATCACCGGGGGTCAGGCCACCGCGTTCGCTGCGTTCAGCGTCTCCAACGTGGATAACGGCACAGCGACGGTGTTCTATATCTCCGATGCTGCTACCGTGGCCATTCGTGCCACAACGAACGTACAGGGCGCAGCGGGGCGCATCACTGGTGGCGTACTTGATGTTTATAAAGTCGCCATGCCAGCAGGTGTTTTCATTGATGATTATTTCCCGATTGTTCATGGGGATGTCATCTTCCGCCAACCGATTCCCATGCTTATTGCCGACAACGCGTTGTACATCGGCAACGGGGTCAACTATTACGGCGGAACGGTCACCCCGTCAAAACTGACGGTCAATCTTATGCCTAAGTTGCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5211b1a865bb02fa37c630540241c7f97d3d01a9371ac03bfe20b2d4afd1f77e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7015
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of giant Salmonella phage, pSal-SNUABM-04 Kwon,J., Park,S.C. and Kim,S.G. 2020-12-25 — GenBank