Protein

View in Explore
Genbank accession
XCO39180.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,96
Protein sequence
MDQEIKTVIQYPTGSTEFDIPFDYLSRKFVRVSLVSDDNRRLLSNITEYRYVSKTRVKLLVATTGFDRVEIRRFTSASERVVDFSDGSVLRANDLNVSQLQSAHIAEEARDAALLAMPEDDAGNLDARNRKIVRLAPGENGTDAINKNQLDTTLGEAGGILSQVKEVQEDIQDYIQKFGDDSAMVRGVNWVYNGGSAIGGETSFIIDKEAPVFAVPYIEVNGSRQFRDWQYEYDPATKRVTLVKPLEAGDFVVCLTTENKLPLEDLLASTGGAASIGKAGGGTVQDGLDATIHGTDVHRDTVTPGKLDTLLVYNGTNAGRDLRGHEFVMPHGTFSATRILRTRGIPAAEPKYTSFTWRGQGSSFTKLVHPSTGGQGDIAFMDYLKDVTMSGFMMDNTALGQGTSNQDTRNGQFWIRHSVDSYFDDLRFAGADALTFCLDHCKNIYSTNLKVDYQLRYPVGAGKSPLIVGDYSEQCMLIGGYVKTVSPDGTIKYAGDLADNDQADDTKWAFINLYGLTFEQKPNSNACMWQEGEGAPSNAHFIGMNYINNGVGHGVSEKAVGTDIGSTFRQAQVRAVWNRAEYISIGGHFIDNDAKYPAGTGGAGTAAAGGVHNDNAKFTSLVGDYFRGNFADYTDYTGASGVNPENSTHITNAKLTSTIRTASSSTSQHLAIVNCQLASAGRIGGGGNGRLHVSVVASHCVGPLGQFGHGQSETYLDVINSTFTAAGSTEAMIAQSGVGNISFANSTFRDYVRVVDGSQTRVTFRNCTFYTCTFTEDDRKARYVNCRFISCTDAPDAFGLNFAADSLDRPSSLRVNVTLTAGGSYTFPAWVLQGRGAYFINVGGNGVNLPACAGIIGKGSATGSGVWTPQWESTAGSIVVSWPSNGYITVTATTAGNYTIGVH
Physico‐chemical
properties
protein length:903 AA
molecular weight: 97229,83120 Da
isoelectric point:5,46265
aromaticity:0,09524
hydropathy:-0,26744

Domains

Domains [InterPro]
IPR005604
ATT
1–127
IPR005604
DC_0778
STR
1–448
DC_0778
XCO39180.1
1 903
Architecture
ATT
STR
ATT 1-127 | STR 128-448 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO39180.1
1 903
Domain Start End Length (AA) Confidence
N-terminal 1 298 298 0,9910
Central domain 299 809 512 0,9907
C-terminal 810 903 93 0,9743
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-298
Central
299-809
C-terminal
810-903

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146027
[NCBI] 		3232207 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO39180.1 [NCBI]
Genbank nucleotide accession
PP889477.1 [NCBI]
CDS location
range 35143 -> 37854
strand +
CDS
ATGGACCAAGAAATTAAAACAGTCATCCAGTATCCTACAGGGTCCACTGAGTTTGACATCCCGTTCGACTACCTGTCCCGTAAGTTTGTCCGCGTATCGCTGGTGTCTGACGACAACCGCAGACTGCTGAGTAACATCACCGAGTACCGATACGTGTCTAAGACCAGAGTTAAACTGCTGGTAGCAACCACTGGTTTCGACCGTGTAGAGATTCGACGGTTCACATCGGCGTCAGAGCGAGTGGTGGACTTCAGCGACGGTTCTGTATTGCGTGCCAACGACCTCAATGTCTCGCAGCTCCAGTCTGCACATATTGCTGAAGAAGCCCGTGATGCCGCACTTCTGGCAATGCCGGAGGATGACGCTGGTAACCTCGACGCCCGCAACCGTAAGATTGTGCGACTGGCTCCCGGTGAGAACGGTACCGACGCTATCAACAAGAACCAACTGGACACCACCTTAGGTGAGGCCGGAGGTATCCTGTCTCAGGTCAAAGAGGTGCAGGAGGACATTCAGGACTACATTCAGAAGTTCGGCGATGACTCCGCTATGGTTCGTGGAGTAAACTGGGTGTATAACGGTGGGTCTGCCATTGGCGGAGAGACCTCCTTTATCATCGACAAGGAAGCACCAGTGTTCGCTGTGCCGTACATCGAGGTAAACGGAAGTCGTCAGTTCCGAGATTGGCAGTATGAGTATGACCCTGCAACCAAGCGGGTAACTCTGGTTAAACCTCTGGAGGCTGGAGACTTCGTTGTGTGCCTAACCACCGAGAATAAGTTACCTCTGGAAGACCTTCTGGCCAGCACTGGCGGTGCCGCTTCAATTGGTAAGGCTGGTGGCGGTACGGTTCAGGACGGTCTGGATGCAACGATACACGGTACCGATGTCCACCGTGACACTGTGACTCCCGGTAAACTAGACACACTCCTTGTGTACAACGGGACTAACGCTGGGCGAGACCTCCGTGGTCATGAGTTCGTAATGCCACACGGTACATTCTCCGCGACTCGCATCCTGAGGACCCGTGGCATCCCAGCTGCTGAGCCTAAGTACACGTCGTTCACTTGGCGTGGTCAGGGCAGTTCGTTCACCAAGTTGGTCCACCCATCGACTGGTGGTCAGGGCGACATTGCGTTCATGGACTACCTGAAGGATGTCACGATGTCTGGTTTCATGATGGACAACACCGCGCTAGGTCAGGGGACTTCCAATCAGGATACCCGTAACGGCCAGTTCTGGATTCGACATTCGGTTGACTCCTACTTCGACGACCTGCGATTTGCTGGTGCTGATGCCCTTACGTTCTGTCTGGACCACTGTAAGAACATCTACTCGACAAACCTCAAGGTAGACTATCAGCTGCGCTATCCGGTTGGCGCAGGTAAGTCCCCGCTCATCGTGGGCGACTACTCGGAGCAGTGCATGCTCATCGGCGGCTACGTCAAGACTGTGTCACCTGACGGTACCATAAAGTACGCTGGGGACCTAGCAGATAACGACCAAGCGGATGATACCAAATGGGCGTTCATTAACCTGTATGGATTGACGTTCGAGCAGAAGCCAAACTCTAACGCCTGTATGTGGCAAGAGGGTGAAGGTGCTCCATCCAACGCCCACTTCATCGGTATGAACTACATCAACAACGGTGTGGGCCATGGTGTGTCTGAGAAAGCTGTGGGTACTGACATTGGGTCTACCTTCCGTCAGGCTCAGGTTCGTGCTGTATGGAACCGTGCTGAGTACATCTCAATCGGTGGCCACTTCATTGACAACGACGCTAAGTATCCTGCCGGTACTGGTGGGGCTGGTACTGCGGCTGCTGGTGGTGTCCATAACGACAACGCCAAGTTCACATCTCTGGTTGGCGACTACTTCCGTGGTAACTTCGCGGATTATACCGACTACACAGGGGCATCTGGTGTTAACCCAGAGAACTCCACCCACATCACCAACGCAAAGTTGACATCCACCATTCGCACAGCGTCCTCCAGTACCTCTCAGCATTTGGCAATCGTGAACTGCCAGTTAGCCTCTGCGGGTCGTATTGGTGGTGGCGGTAACGGGAGACTCCACGTGTCCGTTGTGGCATCTCACTGCGTTGGGCCTCTGGGCCAGTTCGGCCACGGACAGTCCGAGACGTACCTTGACGTCATCAACTCTACGTTCACTGCCGCTGGTAGTACTGAGGCGATGATTGCCCAGTCAGGTGTCGGTAACATCTCGTTCGCCAACTCAACGTTCCGTGATTATGTCCGTGTGGTAGATGGTTCACAGACCAGAGTTACTTTCCGTAACTGTACGTTCTACACCTGTACTTTCACCGAGGACGACCGTAAGGCTCGCTACGTTAACTGCCGATTCATCTCGTGCACTGACGCGCCAGATGCCTTCGGTCTCAACTTTGCGGCAGACTCTCTGGACCGCCCTAGCTCTCTGCGAGTTAACGTAACGTTGACTGCGGGTGGTAGCTATACGTTCCCGGCTTGGGTACTTCAAGGTCGTGGTGCATACTTCATCAACGTCGGTGGCAATGGTGTCAACCTTCCTGCCTGCGCTGGCATCATCGGTAAGGGTAGCGCGACTGGTAGTGGCGTATGGACCCCTCAGTGGGAAAGCACTGCGGGTAGCATTGTTGTATCTTGGCCGTCCAATGGCTACATCACCGTTACGGCAACAACAGCTGGCAACTACACAATCGGCGTTCACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
92f75a6bf241792de467bece80328c6074bf746beb3c5bc73a96fcdf7cfa7f77
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7136
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank