Protein

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Genbank accession
QBO62407.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,72
TF
Evidence RBPdetect2
Probability 0,71
Protein sequence
MADLQRIQFKRTSTAGRKPDANILTPGELAINLADRELYTKDDSNNVITLGQFRGELPSDANLDNYGPTGKFTGIWSKSTSTNAQPTHKFPEENAVGVLEVFVAGQFAGTQRYTTRYGNVFIRSLSAKWNGVDGPWGVWRNIQSGTRPLSTTIDLNDLGGAEHFGLWRNSSNTIATFDRNFPEEGSSAQGLLEVYEGGNYSRTQRYTTRFGVVYTRCLAAAWDATAPKWGPWQQVGNVTPATFYDGNLNDFKTPGLYNILGTDAVINCPTGEGLPPVIVGLLEVKQRASGGAIFQKFTTAGTSATTRGRIFERAYTGGAWGAWNEVYTSYSLPITLGMGGVKSQLTELDWQTFDFIPGGMYSVPLNKVKNMPANMDWGTIDGNLIMLSVGPSEHTGTGRTVQVWRGTVTQANYRYFVVRVAGNPGNRTNTVRRVVVEDGRHTWTAQQDFNGAVNFGGSTVFKSTTTFNTEVKFRSSNAFKMYGGKFGTIFRNDGESLYILSTDEDDQDGNFNTNRPFRYQFKTGDVTLGGTSGADILRLKSSSLAATFGGDVNLSKGTLTFAAGGKQSRDYFRFNHWGDSNNARDNIIQLEDSKGAHFSTERTLATGAIKTKFFGEVESDGRLTIKRPGDAIVLSTTASNALHIRGDVDGNNNWYIGKGGADNSLAFYSYATQAGIHITNNGEIALAPQNFNNVSISKDRIYINATQWVANHSGAWDGQWREEAPIFVDQGSVGEDSYYPLIKGHSQITGQGYSTKVDFGLRRTPQTWGQAVIRVGSAENSPASGRPQGIFEFHANGTSYSPKVKTEALAIGTESIWGSPHLVLGDNDTGLMWGGDGRINLLANGQHIASWGVFHQEHPGLWSVGAGLWTEVDKAIISHGHLIQANDNYSTYVRDIYIRSDIRVKKDLVKFENASQTLSKINGYMYLQKRGLNEDGSERWEPNAGLIAQEVQSILPELVEGDPVGENLLRLNYNGVIGLNTAAINEHTEEISLLKEENKLLRDRLAAIEAKLFG
Physico‐chemical
properties
protein length:1014 AA
molecular weight: 111136,11390 Da
isoelectric point:6,26862
aromaticity:0,10454
hydropathy:-0,43343

Domains

Domains [InterPro]
DC_0538
STR
1–269
DC_0538 DC_0339 Coil
cd19958
STR
54–142
cd19958 cd19958 cd19958 IPR048390 G3DSA:6.20.80.10 IPR030392
cd19958
STR
247–325
cd19958 IPR030392
DC_2320
RBD
928–1013
DC_2320
QBO62407.1
1 1014
Architecture
STR
STR
ATT
STR
RBD
STR 1-327 | STR 410-455 | ATT 456-517 | STR 518-951 | RBD 952-1013 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBO62407.1
1 1014
Domain Start End Length (AA) Confidence
N-terminal 1 847 847 0,1773
Central domain 848 1003 157 0,0916
C-terminal 1004 1014 10 0,9950
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-847
Central
848-1003
C-terminal
1004-1014

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_G2248
[NCBI] 		2502410 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBO62407.1 [NCBI]
Genbank nucleotide accession
MK327932 [NCBI]
CDS location
range 157324 -> 160368
strand +
CDS
ATGGCAGATTTACAGAGAATCCAATTTAAAAGAACAAGTACGGCAGGTCGCAAGCCGGATGCGAATATTCTAACTCCGGGTGAACTTGCTATTAACCTAGCGGATCGAGAACTATATACAAAAGATGACAGCAATAATGTAATTACTTTGGGACAGTTTCGCGGTGAATTGCCATCTGATGCAAATTTAGATAATTATGGACCTACTGGTAAATTTACTGGCATTTGGTCTAAATCAACTTCAACCAACGCTCAACCAACGCATAAATTCCCAGAAGAGAATGCTGTAGGTGTATTAGAAGTATTTGTGGCTGGCCAATTTGCTGGTACTCAGCGATATACAACTAGGTACGGTAACGTCTTTATTCGATCTTTGTCTGCTAAATGGAATGGTGTTGATGGTCCGTGGGGTGTGTGGAGAAATATTCAATCCGGTACTCGTCCATTGTCAACCACAATTGATCTTAATGATCTAGGTGGCGCGGAACATTTTGGTTTGTGGCGGAATAGTTCAAATACCATTGCTACCTTTGACAGAAATTTCCCAGAAGAAGGATCGTCCGCTCAAGGACTTTTAGAAGTATATGAAGGTGGAAACTATTCTCGCACACAGAGATATACGACCAGATTTGGTGTTGTTTATACTCGTTGTCTTGCTGCTGCGTGGGATGCTACTGCTCCTAAATGGGGACCGTGGCAACAAGTCGGTAACGTCACACCAGCGACTTTCTATGACGGAAACCTGAATGATTTTAAAACTCCTGGGTTATATAATATTTTAGGCACTGATGCCGTTATTAACTGTCCTACAGGTGAAGGTTTGCCGCCTGTTATTGTTGGTTTACTGGAAGTTAAACAGCGTGCTTCCGGTGGTGCTATTTTCCAAAAATTTACTACTGCCGGAACGAGTGCAACTACTCGCGGACGTATTTTTGAGCGTGCATATACTGGTGGTGCGTGGGGAGCATGGAACGAAGTATATACATCTTATTCTCTGCCAATTACTTTGGGTATGGGTGGTGTTAAATCTCAATTAACAGAGTTAGATTGGCAAACATTTGACTTTATTCCTGGTGGGATGTATAGCGTACCGCTGAATAAAGTCAAGAACATGCCAGCAAATATGGATTGGGGAACGATTGACGGTAACTTAATTATGTTATCCGTTGGACCTAGTGAGCATACCGGAACAGGTCGCACCGTTCAAGTTTGGCGTGGTACTGTGACACAAGCTAACTACCGTTATTTTGTCGTTCGTGTTGCTGGTAATCCGGGAAATAGAACTAATACCGTTCGCCGTGTTGTTGTTGAAGATGGTCGCCACACATGGACGGCGCAGCAAGATTTTAATGGCGCTGTTAATTTCGGCGGTTCGACCGTATTTAAATCAACTACAACATTCAATACAGAAGTTAAATTCCGCTCATCTAATGCATTTAAAATGTACGGCGGTAAATTTGGTACAATTTTCCGTAATGATGGTGAAAGTCTTTATATTCTTTCCACCGACGAAGATGATCAAGATGGAAACTTTAACACAAATAGACCTTTCCGGTATCAATTCAAAACTGGTGATGTTACTTTAGGTGGAACTAGCGGTGCTGATATTTTAAGATTAAAAAGTAGTTCGCTTGCTGCTACCTTTGGTGGTGATGTTAACTTAAGTAAAGGTACATTGACGTTTGCAGCTGGTGGTAAGCAATCACGCGATTACTTCCGGTTTAATCATTGGGGTGATAGCAATAACGCTCGTGATAACATTATTCAGTTAGAAGATAGTAAAGGCGCTCATTTTTCCACTGAACGTACTTTAGCGACGGGTGCAATTAAAACTAAATTCTTTGGTGAAGTTGAATCCGATGGTCGATTGACTATTAAACGTCCGGGTGATGCTATTGTATTATCGACTACAGCTAGCAACGCTTTGCATATTCGCGGCGATGTTGATGGAAACAATAACTGGTATATTGGTAAAGGTGGTGCTGATAATTCACTAGCATTTTATAGCTATGCAACTCAGGCTGGTATACACATCACGAATAATGGCGAGATAGCACTTGCGCCACAAAATTTTAATAATGTTAGTATTAGCAAAGACCGCATCTATATCAACGCTACACAGTGGGTTGCTAATCATTCTGGTGCGTGGGATGGGCAATGGCGCGAAGAAGCACCTATCTTTGTTGATCAGGGTAGTGTTGGAGAAGATAGCTATTATCCACTTATTAAAGGACATAGCCAGATCACAGGTCAAGGTTATTCTACTAAGGTTGATTTTGGCTTACGTCGTACTCCCCAAACATGGGGACAAGCTGTTATTCGTGTTGGTTCTGCGGAAAACTCTCCGGCTTCTGGACGCCCTCAAGGAATATTTGAGTTTCATGCTAACGGAACTTCATATTCTCCTAAAGTTAAAACCGAAGCACTTGCCATCGGTACAGAGTCTATTTGGGGATCGCCACATTTAGTTCTCGGTGATAATGACACTGGCTTAATGTGGGGTGGTGATGGACGTATTAACCTGCTTGCTAACGGACAGCATATTGCATCATGGGGTGTTTTCCATCAAGAACATCCTGGACTATGGTCTGTCGGTGCTGGGTTATGGACAGAAGTCGATAAAGCGATTATTTCTCATGGTCATTTGATTCAGGCGAATGACAACTATTCGACATATGTTCGTGACATTTATATCCGTTCTGATATTCGCGTGAAGAAGGATTTAGTTAAATTTGAAAATGCATCACAGACACTTTCAAAAATTAATGGATATATGTACCTTCAAAAGCGAGGATTAAATGAAGACGGTAGCGAACGATGGGAGCCTAATGCTGGTTTGATTGCTCAGGAAGTTCAATCCATTTTGCCGGAACTAGTTGAAGGTGATCCGGTTGGTGAGAATCTTCTTCGTTTGAACTATAACGGCGTTATTGGTTTAAATACTGCTGCAATCAACGAACACACAGAAGAAATTTCACTTCTTAAAGAAGAAAATAAACTTCTTCGTGATCGTCTTGCTGCAATTGAGGCTAAATTATTTGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
089e7a0b85e953388d56a157d0626879905367575b743bd87d33f511d5ecfed7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6488
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J. 2019-05-17 — GenBank