Protein

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Genbank accession
QXN68744.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANFYSIITNRGKELETEALASGSKITLVKFVVGDGNGQATPPKPTQTKLVNEKYRGDIGELSVSPDQSTQMMAKIVLPPDVGGFTVREIGILTDAGELYAVANCAAIEKPVGGVSVNMQFRLAVSDTANITLNVATGDGLFLRIDQDLLEIRGRGAQAQKTARESLAIVDASTRQKGLVQLNSATNSTSETQAATPAAVKAANDNANGRLEKNKNLSDVTDKSKARVNLELIKQTSPHDNTTGSLLTVGAFGLGGNSIPVTTASNSDLSKMPAIPFNAIREYKASDGSVYLIGISGISPSGNLVEWLAPENGADAKKIAVRNKDSLFVLYSTGNKPTASDVGAIPFFGQIPAGTNLNTLTRYGVWFNPSNANATLALNYPSTQAGSLQVLQDAGSTQIYTEYQSGSQFRRGFYAGTWSPWRIVYDSGYKPTPDDVNAIAQDSCRVAGFAGGNRDMPYMRHTASNDVVRLLPANGNAVSATKLQTARTINGVAFDGTANINISASQVGSYTKAESDSRFQLIVPASGAVGTYAYARVQSGNLNINFGKTVAASVLTPACGDGSGDAGGSLSGTWRCCGKTWGSGWPSRVTLWIRIA
Physico‐chemical
properties
protein length:596 AA
molecular weight: 62738,57740 Da
isoelectric point:8,85185
aromaticity:0,07047
hydropathy:-0,20067

Domains

Domains [InterPro]
IPR022225
ATT
1–135
IPR022225 IPR005068 cd19958
DC_0381
STR
1–590
DC_0381
IPR051934
Unmapped
2–229
IPR051934
QXN68744.1
1 596
Architecture
ATT
STR
ATT 1-135 | STR 136-590 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Hafnia phage yong2
[NCBI] 		2859519 No lineage information
Host Hafnia paralvei
[NCBI] 		546367 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXN68744.1 [NCBI]
Genbank nucleotide accession
MZ516527.1 [NCBI]
CDS location
range 16943 -> 18733
strand +
CDS
ATGGCTAACTTTTACAGCATTATTACGAACCGCGGCAAAGAGCTGGAAACCGAAGCGCTGGCAAGTGGGAGCAAAATCACGTTGGTGAAATTTGTCGTCGGCGACGGCAACGGGCAGGCCACGCCGCCAAAGCCAACGCAAACCAAGCTGGTGAACGAGAAATACCGCGGCGATATTGGCGAGCTTAGCGTTTCTCCCGATCAGTCGACACAGATGATGGCGAAAATAGTCCTCCCGCCCGATGTGGGCGGCTTTACCGTGCGTGAAATCGGAATACTGACTGATGCCGGTGAACTGTATGCCGTGGCGAACTGCGCTGCGATTGAAAAGCCTGTGGGCGGTGTCAGCGTCAATATGCAGTTTCGTCTGGCGGTGTCAGATACGGCCAATATCACATTAAACGTGGCGACAGGCGACGGACTGTTTTTACGGATTGACCAGGATCTGTTGGAAATCCGTGGGCGAGGTGCGCAGGCGCAAAAGACAGCCCGAGAGTCGCTGGCGATCGTGGATGCGTCAACAAGGCAAAAGGGGCTTGTGCAACTCAACAGTGCCACCAATAGCACCAGTGAAACTCAGGCGGCAACACCGGCCGCAGTCAAAGCTGCGAATGACAATGCTAATGGGCGCTTAGAGAAAAATAAAAACCTTTCTGATGTTACAGACAAAAGCAAAGCAAGAGTCAATCTAGAGCTGATTAAGCAAACATCACCCCATGATAACACCACGGGCTCTCTGTTGACCGTGGGTGCATTTGGGCTGGGTGGTAATTCTATACCAGTTACAACAGCGTCAAATTCTGATTTATCTAAAATGCCCGCAATACCATTTAATGCCATTCGTGAATATAAAGCCTCTGATGGATCTGTATATCTAATTGGGATTAGCGGTATATCTCCAAGCGGAAACTTAGTGGAATGGTTAGCACCTGAAAATGGTGCTGACGCAAAAAAAATAGCAGTCAGAAATAAAGACAGCCTGTTCGTGCTCTATAGTACGGGAAATAAGCCAACGGCGAGTGATGTGGGGGCTATTCCATTTTTTGGACAAATTCCGGCAGGGACAAACCTCAACACGCTAACTAGATATGGTGTCTGGTTTAATCCCAGCAACGCCAATGCCACGCTGGCATTAAATTACCCCAGCACTCAGGCCGGTTCATTGCAGGTTTTGCAAGATGCAGGAAGCACGCAGATTTATACCGAGTATCAGAGTGGAAGCCAATTTAGGCGCGGTTTTTATGCGGGGACATGGAGTCCTTGGCGTATCGTCTATGACTCGGGTTACAAACCCACACCAGATGACGTCAATGCAATTGCTCAGGACAGCTGTCGCGTTGCTGGGTTTGCCGGTGGGAACCGTGACATGCCCTATATGCGGCACACAGCCTCAAACGACGTTGTCCGGCTATTACCGGCTAATGGTAACGCTGTTTCAGCTACAAAACTCCAAACCGCGCGAACTATCAACGGCGTTGCTTTCGATGGTACGGCGAATATTAACATTTCAGCAAGCCAAGTTGGTTCATATACAAAGGCTGAGTCTGATAGCCGTTTTCAGTTAATAGTACCGGCTTCTGGTGCTGTAGGCACTTACGCTTATGCCCGAGTCCAATCAGGAAATCTAAATATAAACTTTGGTAAAACTGTCGCAGCTTCAGTGCTTACCCCCGCATGCGGTGACGGGAGCGGTGATGCTGGTGGCTCTCTCTCAGGAACGTGGCGTTGTTGTGGCAAGACTTGGGGTTCTGGTTGGCCCAGTCGTGTAACTTTATGGATTAGAATTGCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1a1625547400752e78e2feb158293545d8f4276b332164940b440693f3de66ab
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7523
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic analysis of a novel active prophage of Hafnia paralvei Pan,L., Li,D., Lin,W., Qin,W., Xu,L. and Tong,Y. 2022 35752683 GenBank