Protein

View in Explore
Genbank accession
WMM95024.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MANSFVRYTGNNSTTSYSIPFSYRATSDLTVTLSGVVTTAYTLNSAGTTLTFNTAPAQDVAIEIRRRTSQGTKLVDYASGSVLTENDLDTDSDQAFFMSQEAIDDAGDVIKVSNTNFQWDVQNKRLTNVADPVNNTDGVNKQFISTNLPNITTVAGIASDVTTVANNNANVTAVANDATDIGTVATNIASVNTVATNINDVIKVADDLNEAISEVETVANDLNEATSEIEVVANNITNVNTVGTNISNVNTVAGVNADVTTVAGISANVTSVAGISTAVSNVNSNSTNINAVNANSANINTVAGINADVTSVAGISSAVSAVNSNSTNINAVNANXXNITXLQVTTQIFLQ
Physico‐chemical
properties
protein length:351 AA
molecular weight: 35947,66080 Da
isoelectric point:4,05003
aromaticity:0,04023
hydropathy:0,00977

Domains

Domains [InterPro]
IPR005604
ATT
3–115
IPR005604 DC_0265
DC_0265
STR
28–145
DC_0265 Coil
DC_0265
STR
217–300
DC_0265
WMM95024.1
1 351
Architecture
ATT
STR
ATT 3-115 | STR 116-300 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC304P
[NCBI] 		3072839 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter
[NCBI] 		198251 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WMM95024.1 [NCBI]
Genbank nucleotide accession
OR420736.1 [NCBI]
CDS location
range 31355 -> 32410
strand +
CDS
ATGGCAAATAGTTTTGTACGTTATACAGGTAATAACAGTACAACATCATATTCTATACCTTTTAGTTATAGAGCTACAAGTGACCTTACAGTTACATTATCAGGGGTAGTAACTACAGCTTACACTTTAAATAGTGCAGGAACTACACTAACTTTTAATACTGCACCTGCTCAAGATGTAGCCATAGAAATTAGGAGAAGAACCTCACAAGGTACTAAATTAGTAGATTATGCTTCTGGTTCTGTACTTACAGAAAATGATTTAGATACAGATAGTGACCAAGCATTCTTTATGTCTCAAGAGGCTATTGATGATGCAGGAGACGTTATCAAAGTCTCTAATACAAACTTTCAATGGGACGTACAAAATAAAAGATTAACAAATGTTGCAGACCCAGTAAATAATACAGACGGTGTTAACAAACAGTTTATTTCTACAAATTTACCAAACATTACAACAGTTGCAGGTATAGCTTCTGATGTAACTACAGTTGCTAATAACAATGCTAATGTTACAGCAGTTGCAAATGATGCAACAGATATAGGTACAGTAGCTACAAACATAGCTTCAGTTAATACAGTTGCTACTAACATCAATGATGTAATTAAAGTTGCTGATGATTTAAACGAAGCAATCTCTGAAGTAGAAACAGTAGCAAATGATTTAAACGAAGCAACTTCAGAAATAGAAGTTGTTGCTAATAATATTACAAATGTAAATACAGTTGGTACTAATATTTCTAATGTTAATACAGTTGCAGGTGTTAATGCTGATGTGACAACTGTTGCAGGTATCAGTGCAAACGTAACAAGTGTTGCAGGTATTTCAACAGCAGTTTCAAATGTCAACTCAAATAGCACAAATATCAATGCGGTTAATGCTAATTCAGCTAACATAAACACAGTAGCAGGTATAAATGCAGATGTAACTTCAGTTGCAGGTATTTCTAGTGCAGTATCAGCCGTCAATTCAAATTCAACAAACATTAATGCAGTTAATGCYAAYWSWRCAAAYATAACACWGTTGCARGTAACAACTCAAATATTTCTACAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
6e225affaf0a15d831e660a231ac20c9e979b7142963335b5e6fa6bda7bfcddb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8532
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50