Protein

View in Explore
Genbank accession
YP_009791647.1 [GenBank]
Protein name
membrane associated protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MADYGILLTNDRGNVWVSPQSIPLALLSKQGITLRGGTHSDEVRSVTYDTNHPCVPFVVFHGSSPQGAFTKIRYSGNTCSVVFSFGKQNVYAEVYFFSVFPQSNPGYGLAIWDENGTLILTNETRTLSDVQTYGTGFNLNVTNGGKWAVSPVQLGAIVGVIRDPYPRPFQGDYCAAAFFNGSSTQLTAYLTQAPGGVASDLTSVDMKNTCIAIDCARYD
Physico‐chemical
properties
protein length:219 AA
molecular weight: 23666,24290 Da
isoelectric point:5,51909
aromaticity:0,11872
hydropathy:-0,05205

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009791647.1
1 219
Domain Start End Length (AA) Confidence
N-terminal 1 103 103 0,2021
Central domain 104 208 106 0,0012
C-terminal 209 219 10 0,9971
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-103
Central
104-208
C-terminal
209-219

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KPN N141
[NCBI] 		2024239 Uroviricota > Caudoviricetes > Drexlerviridae > Webervirus N141 >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009791647.1 [NCBI]
Genbank nucleotide accession
NC_047841 [NCBI]
CDS location
range 40431 -> 41090
strand +
CDS
ATGGCAGATTACGGAATTTTACTTACCAATGATAGAGGCAATGTTTGGGTTTCGCCTCAAAGCATCCCGCTGGCACTGCTATCAAAGCAAGGCATCACTCTTAGGGGGGGGACTCACTCCGATGAGGTGAGATCGGTAACTTACGACACGAATCACCCATGCGTTCCATTCGTTGTCTTTCATGGCTCTTCGCCACAAGGTGCATTCACAAAAATCAGGTACAGCGGAAACACTTGCAGCGTTGTTTTTTCTTTTGGTAAGCAAAACGTATATGCGGAGGTTTATTTTTTCTCTGTGTTCCCACAGTCAAATCCTGGTTATGGGCTTGCAATTTGGGATGAAAACGGCACGCTGATTTTGACCAATGAAACCAGAACACTTTCAGACGTACAGACCTACGGCACTGGTTTTAATCTAAACGTCACTAACGGCGGGAAGTGGGCGGTTAGTCCTGTTCAGTTAGGCGCGATCGTTGGTGTTATTCGTGATCCATACCCAAGACCATTTCAGGGAGACTATTGCGCAGCGGCATTCTTTAACGGCTCAAGCACGCAACTTACCGCATATCTAACGCAGGCACCAGGAGGGGTCGCCAGCGATCTAACCTCCGTCGATATGAAAAACACCTGCATCGCTATTGATTGCGCAAGGTATGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
962e92d489a942b73bb9b820c06d25dea489298ea1d3ce266451b20334b1a629
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8723
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of the Klebsiella phage YMC16/01/N141_KPN_BP Jeon,J., Yong,D. and Lee,K. 2014-09-04 — GenBank