Protein

View in Explore
Genbank accession
YP_010059687.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MKKRLTLNFKRSIASEYNRGDRLEVVVTPLDTASSPDGNVTLVEQKQVQRVTLRNEVTPLYFDITPTYEPGLTEPIFYRIAWRVGNLGRITETDFAMPDRDVDFDDLGELGNIIDGQSYLREADLGVAGRVARLNNDGNVLDAQGNEIGAISLGPITAALSQEVRDRQSAVADMDRRLTVRLETQVTSLSATINTRVSTEAQNRANALAVEKLERELGDQAVNDRVTSLQQQNNTSITGLTNRVNAHDTALAGKADLVNGKLATSQIPAISLITRVTVPDEAAMLALTRSQVQPGDLAVRPDGNWQLFGDDPSDIENWMPTSSGGNVASVNGQTGIVVLSAADVGARARNEAIPQADVNGLVSALSARATTAQLSTTNSNVTALTGRMTTAEATLTTLDGQVIKKVDGLLPTALLGDDVPRVNSENHLVRKDGTLITTGGGGTGGGAVDSVNNKVGAVILNASDVGARPVGVPIPQSEVDGLVPALNAKTDSTTTQALATRVSRAEVDIADLQANGGGGGTGTSSKTSVSWVADVETDPRLVTVKSPFGLFGGSGAPYYDPNGAMEGEAAVPYVDENGYLHIRRLNPNATPAPVPASQGALSDLTTRVTLVEQRAKPETGWSYDDMDATLQASLDVVDNATASSSGDSLVLRNTAGTFAVSEPTGASHPATKGYVDTGLSGKASTASVTSLTSTVNGKASQSDLSALTTRVSNAESAFAGKADLDGTGKLAIGQLPALSGANISGWSTKADLDGAGKVPLSQVPTGIPQASVNGLTSALAAKADLVNGKLSTSQIPALAIGDTVSVANRAALLALTPTQVQRGDIGIIEDTSDKGTYRLIADDPSQWVNWKALSLGGGSVTSVNGQTGIITLGAADVGARSASTPVPQADVANLVSDLSAKAATSYVDAQVATRTTPAAVTTQINSQSVSKPAVDYVATSPVSLSGAQSVDGVLVGAGKRVLLTAQAASAQNGIYVSATGAWLRATDGAAGSTFMPNTVVAVRGGASNSNSIWQLTTTTSGVVDTNAQNWSKVLQGGPPLVYTAGNGIDITNQVASVKLAANPGLIADSNGLRLDTSAVIRKFAGTVPGGGTTVTIDHNLGTTDITFAMWEVATNTLVAIAPSILNANQISLEFAVAPSANQFRVVMTG
Physico‐chemical
properties
protein length:1149 AA
molecular weight: 118254,30800 Da
isoelectric point:4,82167
aromaticity:0,03742
hydropathy:-0,08294

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Stormageddon
[NCBI] 		2656541 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010059687.1 [NCBI]
Genbank nucleotide accession
NC_054726 [NCBI]
CDS location
range 129013 -> 132462
strand +
CDS
GTGAAGAAGCGTCTGACCCTGAACTTCAAGCGGTCCATCGCCAGCGAGTACAACCGTGGCGATCGGCTTGAAGTCGTCGTGACGCCGCTGGACACCGCGAGCAGCCCCGACGGAAACGTCACCCTGGTCGAACAGAAGCAGGTGCAGCGGGTAACCCTCCGCAACGAGGTGACCCCGCTGTACTTCGACATCACTCCGACCTACGAGCCCGGCCTGACCGAGCCGATTTTTTATCGGATCGCCTGGCGCGTGGGCAATCTCGGGCGCATCACCGAGACCGACTTCGCCATGCCGGACCGCGATGTCGACTTCGACGACCTCGGCGAACTCGGCAACATCATCGACGGCCAGTCCTACCTGCGTGAGGCTGACCTCGGCGTGGCGGGCCGCGTAGCTCGGCTCAACAACGACGGCAACGTGCTCGACGCCCAGGGCAATGAGATCGGCGCGATCTCGCTGGGGCCGATCACCGCTGCGCTGTCTCAGGAGGTCCGCGACCGTCAGAGCGCGGTGGCCGACATGGACCGCCGCCTGACGGTTCGCCTGGAGACCCAGGTGACCTCGCTGTCGGCGACGATAAACACCCGCGTCTCCACCGAGGCACAGAACCGCGCGAACGCGCTGGCCGTGGAGAAGCTGGAGCGCGAGCTGGGCGACCAGGCGGTCAACGACCGTGTCACCTCGCTGCAGCAGCAGAACAACACCTCGATCACCGGCCTGACGAATCGCGTCAACGCCCACGACACCGCACTGGCTGGCAAGGCCGACCTGGTCAATGGCAAGCTGGCGACCTCCCAGATTCCGGCCATCTCGCTCATCACCCGCGTCACCGTGCCGGACGAGGCGGCGATGCTCGCGCTCACCCGCTCGCAGGTCCAGCCGGGCGACCTCGCTGTTCGTCCGGACGGCAACTGGCAGCTGTTCGGCGACGACCCCTCCGACATCGAGAACTGGATGCCTACGTCGTCAGGCGGCAACGTCGCCTCCGTCAACGGGCAGACCGGCATCGTTGTGCTGTCGGCGGCGGACGTGGGCGCTCGCGCGCGCAACGAGGCGATCCCGCAGGCTGACGTCAACGGGCTGGTCTCTGCACTGAGCGCCCGCGCGACCACCGCGCAGCTGTCGACCACCAACAGCAACGTCACCGCGCTCACCGGGCGGATGACCACCGCCGAGGCGACGCTGACCACCCTCGACGGGCAGGTCATCAAGAAGGTCGACGGCCTGCTGCCGACCGCGCTGCTCGGCGACGACGTGCCGCGCGTGAACTCCGAGAACCACCTGGTGCGCAAGGATGGCACCCTCATCACCACGGGCGGCGGCGGTACCGGCGGTGGCGCGGTGGACTCGGTCAACAACAAGGTCGGCGCGGTCATCCTGAACGCCTCCGACGTCGGCGCGCGTCCGGTGGGTGTACCCATCCCGCAGTCCGAGGTTGACGGCCTGGTCCCGGCACTGAACGCCAAGACCGACAGCACGACCACCCAGGCCCTGGCGACCCGCGTCTCGCGCGCAGAGGTCGACATCGCCGACCTGCAGGCCAATGGTGGCGGTGGCGGCACGGGCACTTCGTCCAAGACGAGCGTGTCGTGGGTGGCCGACGTCGAGACCGATCCCCGGCTGGTCACGGTCAAGTCTCCGTTCGGCCTGTTCGGCGGCTCGGGCGCTCCGTACTACGACCCCAACGGTGCGATGGAGGGCGAGGCCGCTGTCCCCTACGTGGACGAGAACGGCTACCTGCACATCCGGCGACTCAACCCCAACGCCACCCCCGCTCCGGTCCCGGCCAGCCAGGGCGCGCTGTCGGACCTGACCACCCGCGTCACGCTGGTCGAGCAGCGGGCCAAGCCGGAGACCGGCTGGTCCTACGACGACATGGACGCGACGCTCCAGGCGAGCCTCGACGTCGTGGACAACGCCACCGCTTCCAGCTCCGGCGACTCGCTGGTGCTGCGCAACACGGCGGGCACCTTTGCGGTCTCCGAACCAACCGGCGCGAGCCACCCCGCGACCAAGGGCTACGTCGACACCGGCCTGTCGGGCAAGGCGAGCACCGCTTCGGTCACCTCGCTGACGTCCACCGTCAACGGCAAGGCGAGCCAGTCTGATCTCTCGGCGCTGACCACCCGCGTGTCGAATGCCGAGAGCGCCTTCGCGGGCAAGGCGGACCTGGACGGAACCGGCAAGCTCGCCATCGGCCAGCTCCCCGCGCTGTCGGGGGCGAACATCTCCGGCTGGTCCACCAAGGCCGACCTGGACGGCGCGGGCAAGGTTCCGCTGTCGCAGGTCCCCACCGGCATCCCCCAGGCGAGCGTCAACGGCCTGACTTCTGCGCTCGCGGCCAAGGCTGATCTGGTCAACGGGAAGCTGTCCACCAGCCAGATTCCCGCGCTCGCCATCGGCGACACCGTCTCGGTCGCCAACCGTGCGGCCCTGCTCGCGCTCACCCCTACCCAGGTGCAGCGCGGCGACATCGGCATCATCGAGGACACCTCGGACAAGGGCACCTACCGCCTGATCGCCGACGATCCCTCGCAGTGGGTGAACTGGAAGGCGCTCTCCCTCGGCGGTGGCTCGGTCACCTCGGTCAACGGCCAGACGGGCATCATCACGCTCGGCGCTGCCGATGTGGGCGCACGCTCGGCGAGCACCCCGGTGCCGCAGGCCGACGTCGCCAACCTGGTCTCTGATCTCTCGGCCAAGGCCGCGACGAGCTATGTCGACGCCCAGGTCGCCACCCGCACCACCCCGGCGGCGGTCACTACCCAGATCAACTCGCAGTCGGTCTCCAAGCCCGCTGTCGACTACGTCGCCACCAGCCCCGTGTCGCTGTCGGGCGCGCAGTCGGTGGACGGCGTCCTGGTCGGCGCGGGCAAGCGCGTGCTGCTCACCGCGCAGGCGGCATCGGCACAGAACGGCATCTACGTTTCGGCGACCGGAGCCTGGCTGCGCGCGACCGATGGCGCGGCGGGCTCGACGTTCATGCCCAACACCGTCGTCGCGGTCCGGGGCGGCGCGAGCAACAGCAACTCGATCTGGCAGCTGACCACCACGACCTCCGGCGTCGTGGACACCAACGCGCAGAACTGGAGCAAGGTGCTCCAGGGCGGTCCCCCGCTGGTCTACACCGCTGGCAACGGCATCGACATCACCAACCAGGTGGCGTCGGTCAAGCTCGCGGCCAATCCCGGCCTGATCGCCGACAGCAACGGACTGCGCCTGGATACCAGCGCGGTCATCCGCAAGTTCGCGGGCACGGTCCCCGGCGGCGGCACGACGGTCACCATCGACCACAACCTCGGTACGACCGACATCACGTTCGCGATGTGGGAGGTCGCGACGAACACCCTCGTCGCCATCGCACCGTCGATCCTGAACGCCAACCAGATCAGTCTGGAGTTCGCCGTGGCCCCGTCGGCGAATCAGTTCCGCGTCGTTATGACTGGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
605bb9d59b8949485a75f7f2be39f7d1eb384ecf963ac7c1e6a577709fbcbc74
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3334
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50