Protein

View in Explore
Genbank accession
WGL30752.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,53
Protein sequence
MADLTARIKPKKSSTAGEVPQAADLEVAELAVNTADGKLFVKHTDNSIKEISGGGGGGGISGLPNYDGILMAFDGGDQSTTFTEETGKISSWTAGGSVKQVASPVKFGASALSCRSATADQLISNDLVGTSAREQFRINKGDFTVEFWVHIPTGASTNWQNVFMLQSSNGINEIMGCTIRKVSANGLVDSVLFYLDDGNGGAAVVINQQNVDLFDYDTWHHVAFCRSGQVLKYFVDGVEHYSQANTTSVGTSDVAADMLLTLGVNHPLTSERFDGYLDDFYYVPQAKYTGAFTPPTAAIVPLEVPPNDGDVLVYDSVDAGYRAQALPLGYLGDVKGPISNAYTLTNKVTNYLNVANDGDWSTDVWGGAGGGYLISWESLTAGDTVLSAIQAGDEVTIYWPSGEVVTETVAQTYAQSTNNGIVINDPTNSPWNTQALGTALTIQCKTRIETTALAPTDGQVLTYDAANSQWEPQTAPVPDLNEVGKVSYVSPPTSYRYDTYSASLSSNGQWAQDGIGLYVRKIDSDGKDITQDPLYPSTNFWYSTDGVTWVGDSGTVSQSTNFFSWGIGNPGLAQNTLYVSYNDPSLSVQDGQVLTYVAANSQWEAADPAGATELNDLTDVATGLEAGTQTWTGTWTVSTVTINQTMNAAGNMGPATSNEVNLHTQDNSATDRSTQLSALDGQTLWWRKNSEAWQSETMTGYRTFASTLIPQAAGFSASVGAAQLGDSYTLSDGGPAIDYSPTAGQVLTYVDARSRWEPADAPVESNTTTAGAGSSAVSNIVTISQVDYDALGTPDANTIYFIV
Physico‐chemical
properties
protein length:803 AA
molecular weight: 85203,28100 Da
isoelectric point:4,16325
aromaticity:0,09465
hydropathy:-0,23437

Domains

Domains [InterPro]
DC_2085
STR
13–280
DC_2085 DC_1461 IPR056923
G3DSA:2.60.120.200
STR
77–282
G3DSA:2.60.120.200
IPR013320
STR
84–282
IPR013320
PF13385
LEC
137–281
PF13385
WGL30752.1
1 803
Architecture
STR
STR
RBD
STR 13-282 | STR 455-585 | RBD 779-803
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CRES3
[NCBI] 		3038222 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGL30752.1 [NCBI]
Genbank nucleotide accession
OQ587941.1 [NCBI]
CDS location
range 50570 -> 52981
strand +
CDS
ATGGCTGACCTTACCGCTCGTATCAAGCCGAAGAAGAGCAGCACGGCTGGTGAAGTCCCCCAGGCTGCTGATCTGGAAGTTGCGGAACTTGCGGTAAACACTGCCGACGGTAAGCTGTTCGTTAAGCACACCGACAATAGCATTAAGGAGATATCAGGCGGAGGAGGAGGCGGAGGAATCTCGGGGCTGCCGAACTACGACGGCATCCTGATGGCCTTCGACGGTGGCGACCAGTCCACCACCTTCACCGAGGAGACTGGCAAGATTTCCAGCTGGACAGCCGGCGGCTCCGTCAAGCAGGTCGCTTCGCCCGTCAAGTTTGGTGCTTCCGCTCTGTCGTGCCGCAGCGCCACCGCGGACCAGCTCATCAGTAATGACCTCGTGGGAACGTCCGCCCGTGAGCAGTTCAGGATCAACAAGGGCGATTTCACTGTTGAGTTCTGGGTCCATATCCCGACCGGCGCAAGCACTAACTGGCAGAATGTATTCATGCTGCAGTCGTCGAACGGAATCAACGAGATCATGGGCTGCACCATTCGCAAGGTTTCTGCAAATGGTCTTGTAGACTCTGTTCTTTTCTATCTTGACGATGGCAATGGTGGTGCGGCCGTCGTGATCAACCAGCAAAACGTTGATCTCTTCGACTACGACACCTGGCACCATGTTGCCTTCTGCCGCTCTGGGCAAGTTCTGAAGTACTTTGTCGATGGCGTTGAGCACTACTCTCAGGCCAATACAACTTCTGTGGGCACCTCGGACGTCGCCGCAGACATGCTCCTCACCCTTGGTGTCAATCACCCCCTCACCAGCGAGCGTTTTGACGGCTACCTGGATGACTTCTACTACGTGCCCCAGGCTAAGTACACTGGCGCCTTTACTCCTCCTACCGCGGCCATCGTTCCCCTTGAGGTGCCCCCGAATGACGGAGACGTGCTGGTCTACGATTCAGTCGATGCTGGGTATAGGGCGCAGGCGCTACCCCTGGGATACCTGGGTGATGTCAAGGGCCCTATCTCGAACGCCTACACTCTTACTAATAAGGTAACAAATTACCTCAACGTCGCTAACGATGGAGACTGGTCAACAGACGTCTGGGGCGGCGCTGGCGGCGGCTACCTGATTTCGTGGGAGTCTCTCACCGCTGGCGATACCGTGCTGAGCGCGATTCAGGCCGGTGACGAGGTCACGATTTACTGGCCGTCTGGCGAGGTCGTCACCGAGACGGTTGCACAGACCTACGCTCAAAGCACCAATAATGGAATTGTCATCAACGATCCCACAAACTCTCCATGGAACACTCAGGCGCTTGGGACTGCACTCACTATTCAGTGCAAGACTAGAATCGAAACAACCGCACTCGCCCCCACTGACGGCCAAGTTCTGACCTACGATGCCGCCAATAGTCAATGGGAGCCTCAGACTGCGCCGGTTCCAGATCTTAACGAGGTCGGAAAGGTCAGCTATGTTTCCCCGCCGACGTCCTATCGCTACGACACATACAGTGCTAGTCTAAGCAGTAACGGTCAATGGGCGCAGGACGGCATTGGCTTATACGTCCGCAAGATCGACTCCGACGGAAAGGACATCACTCAGGATCCGCTGTATCCGTCCACCAATTTCTGGTATTCAACCGACGGCGTAACCTGGGTCGGTGACAGCGGAACGGTTTCTCAAAGCACTAACTTCTTCAGCTGGGGTATTGGTAACCCCGGTCTTGCCCAGAACACGCTCTACGTCAGCTATAACGATCCTTCGCTTAGCGTGCAGGACGGCCAGGTACTGACCTACGTTGCCGCCAATAGTCAGTGGGAGGCTGCGGACCCAGCTGGGGCGACAGAGCTGAATGACCTGACCGACGTCGCCACTGGATTAGAGGCCGGCACTCAGACCTGGACGGGTACTTGGACGGTTAGCACCGTAACAATAAACCAGACTATGAATGCTGCCGGTAACATGGGGCCGGCGACTTCTAACGAGGTTAACCTCCACACGCAGGATAACTCGGCGACCGACCGATCTACCCAGCTTTCTGCCCTGGATGGTCAGACTCTGTGGTGGAGGAAGAACAGCGAGGCCTGGCAGTCGGAAACGATGACCGGATACCGGACCTTCGCCAGTACCCTGATCCCGCAAGCAGCCGGTTTTAGCGCATCCGTGGGCGCCGCCCAGCTCGGCGACTCGTACACCCTGTCCGATGGTGGTCCTGCCATCGACTACAGCCCCACCGCTGGCCAGGTCCTGACCTACGTCGACGCAAGGAGTCGGTGGGAGCCTGCGGACGCACCTGTCGAATCCAATACCACCACCGCTGGTGCTGGCTCCAGTGCCGTCTCGAACATCGTAACCATCTCCCAGGTAGACTACGATGCGCTGGGCACGCCTGACGCCAACACCATCTACTTCATCGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
22842e2fd5df8ba44237e2bf910820bc45b6d0f3671481fb2cbe56f5f59f3774
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3030
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50