Protein

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Genbank accession
VUE36573.1 [GenBank]
Protein name
X-linked retinitis pigmentosa GTPase regulator
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFPIISNTNILPIPGIKKLVTSANAVLYLTTGGDLYGAGSNRNGELGLGHTNPVPKFIFIRSSVKDVWASGSTQVVLYIDISNQFWFAGDTRVLSGSDTLNFNTTFVNRTDLFSPVGITTDAQISDIYFHYGAKMQVVLKDGSYYCSGKNNVTTISSFGDGTNTNSVNVLRFIRSDVKEARGNFIKDSSNNLLGCGINGSYQLGTGNTTSTTTFISVMTSISTFDTGSGGTSTFVIKDNKLYITGTSLVGSNIYGEFGNGGTITVYRTLTEITTAGSSISKLFVGLNSINTHLVNNGIYMNTGYNVSGQLGRGNTTNVLTFSSITPVWGSSIIKLIIGSNQNTYILTDNNKLYACGAVYGGYSTTHSSNVLIFEEIIIVV
Physico‐chemical
properties
protein length:382 AA
molecular weight: 40842,44270 Da
isoelectric point:8,28420
aromaticity:0,10209
hydropathy:0,07644

Domains

Domains [InterPro]
DC_0433
ATT
1–140
DC_0433 IPR009091
IPR009091
STR
4–185
IPR009091 IPR009091
IPR009091
STR
11–249
IPR009091
IPR000408
STR
35–82
IPR000408
VUE36573.1
1 382
Architecture
ATT
STR
ATT 1-140 | STR 141-376 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VUE36573.1
1 382
Domain Start End Length (AA) Confidence
N-terminal 1 120 120 0,1023
Central domain 121 328 209 0,5383
C-terminal 329 382 53 0,9619
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-120
Central
121-328
C-terminal
329-382

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage fHe-Yen9-04
[NCBI] 		2052742 Uroviricota > Caudoviricetes > Eneladusvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VUE36573.1 [NCBI]
Genbank nucleotide accession
LR596615 [NCBI]
CDS location
range 347518 -> 348666
strand -
CDS
ATGTTACCTTTTCCAATAATAAGCAATACTAATATATTACCGATACCAGGAATAAAGAAACTTGTCACTTCAGCCAATGCGGTATTATACTTAACCACTGGTGGTGACTTATATGGTGCTGGTTCAAATAGAAATGGTGAATTAGGATTAGGGCATACTAATCCAGTACCTAAATTTATTTTTATACGTTCTAGTGTTAAAGACGTATGGGCATCTGGAAGTACACAAGTAGTACTATACATTGACATTAGTAATCAATTTTGGTTCGCTGGAGATACAAGAGTACTATCTGGTTCAGACACTTTAAATTTTAATACTACATTTGTCAATAGAACTGATTTATTCAGTCCAGTAGGTATCACAACTGACGCACAAATTTCTGATATATATTTCCATTACGGTGCAAAAATGCAAGTAGTACTAAAAGATGGTTCATATTATTGTTCAGGGAAAAATAATGTAACTACAATATCGTCTTTTGGTGATGGAACCAATACTAATTCAGTGAATGTTTTAAGATTTATTCGTTCAGATGTAAAAGAGGCTAGAGGTAATTTCATAAAGGATTCATCAAACAACTTATTGGGTTGTGGTATTAACGGTTCATATCAGTTAGGAACCGGAAACACAACAAGTACTACAACATTTATTTCGGTAATGACTAGTATTAGCACATTTGATACTGGTAGTGGTGGTACTTCAACCTTTGTAATAAAGGACAATAAATTATATATAACAGGTACATCATTAGTTGGTTCAAATATATATGGTGAATTTGGAAATGGTGGTACAATAACAGTGTATCGAACTTTAACTGAAATAACAACTGCCGGTTCATCAATTTCAAAATTATTCGTAGGTCTTAATTCAATCAATACACATTTAGTTAATAATGGAATTTACATGAATACGGGTTATAATGTGAGTGGTCAGTTAGGTAGGGGAAATACTACTAATGTGTTAACATTTAGTTCAATTACTCCTGTTTGGGGAAGTTCAATAATAAAATTAATTATTGGTAGTAATCAAAATACTTATATATTAACCGATAATAATAAGTTATATGCATGTGGTGCAGTTTATGGTGGATACAGTACTACACACAGTTCAAACGTATTAATATTTGAAGAAATTATTATAGTAGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d4ee4fc4cc604fb4feca7bec22dfdb3c4dbd86d0f89c96e05e9b2532238320ea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9003
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50