Protein

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Genbank accession
QIO00959.1 [GenBank]
Protein name
putative minor tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MFYALMRESKIVVEYDGRAYHFDALSNYDINTSYEEFKTLRRTIHRRTNYADSIINAQTPSSISLAINFSNTLTEANFFEWMGFDREGTTFLLPLYSTNIEPTMFNIYIVNKDNNCVYFENCYVSTVDFSLDKSVPILNVGIESGKFSEVSTFTPSGIVQGEVMSYSPPRVSTNSNVLPALLSASMSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATIAFYYTKQFAGDMFYNIEPETDIPLTIRNGHISIDFPSARITKRLQFSDLYRIEWDVIPTADSDPVRIDFFGEIKK
Physico‐chemical
properties
protein length:298 AA
molecular weight: 34300,17420 Da
isoelectric point:4,95900
aromaticity:0,14094
hydropathy:-0,27148

Domains

Domains [InterPro]
IPR056389
ATT
1–297
IPR056389
QIO00959.1
1 298
Architecture
ATT
ATT 1-297 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIO00959.1
1 298
Domain Start End Length (AA) Confidence
N-terminal 1 11 11 0,9093
Central domain 12 210 200 0,0511
C-terminal 211 298 87 0,5769
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-11
Central
12-210
C-terminal
211-298

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage smaug
[NCBI] 		2713322 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus smaug
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIO00959.1 [NCBI]
Genbank nucleotide accession
MT074461 [NCBI]
CDS location
range 22551 -> 23447
strand +
CDS
ATGTTTTATGCTCTCATGCGAGAGTCTAAAATAGTTGTCGAATACGATGGCAGGGCTTATCATTTTGATGCCCTGTCAAATTACGATATCAATACGTCCTATGAGGAATTTAAAACTCTTCGTAGGACTATCCATCGTAGAACTAACTATGCTGACTCTATTATTAATGCTCAAACTCCATCTTCAATATCGCTGGCTATAAATTTTAGTAATACCCTTACTGAAGCTAACTTCTTTGAATGGATGGGCTTTGACCGAGAGGGTACTACCTTCCTGCTACCACTTTATAGCACGAATATTGAACCAACAATGTTTAATATCTACATAGTTAATAAAGATAATAACTGTGTGTACTTTGAGAACTGCTATGTATCTACTGTAGACTTTTCTCTAGACAAAAGCGTTCCTATCCTAAATGTAGGAATTGAATCTGGTAAGTTCTCTGAGGTGTCTACTTTTACTCCTTCTGGTATCGTTCAGGGTGAGGTTATGTCTTACAGTCCTCCTAGAGTATCCACCAACAGTAATGTTTTGCCAGCTCTTTTATCCGCTTCTATGTCATTCCAGCAACAATGTTCTTGGAGGGAAGATAAAAGCGTATTTGACATAAACAAAATATATAATAATAAGAGAGCTTATGTTAATGAAATGAATGCTTCGGCAACAATTGCATTTTACTACACTAAGCAATTTGCTGGTGATATGTTTTATAATATTGAACCCGAAACTGACATACCATTAACCATCCGGAATGGACATATTTCGATTGACTTCCCTTCAGCACGTATAACAAAACGCCTACAATTCTCGGATCTGTATAGGATTGAGTGGGATGTAATTCCTACGGCTGATTCTGATCCGGTAAGAATCGACTTCTTTGGAGAAATAAAGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1eaf0b9d642788c82c20d2c7e0c789eb4b927ece90da5d25025126136238409f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8330
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank