Protein

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Genbank accession
YP_009849304.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MVDLTKDAKLIAIDLINEANGTNFTDKTIALSGPVVNNFVLNGLNTEVTASPNAGDSNDIPVTTYYSRLHLNHLLERPYAALENQAPSRLAGLLPSINAKYRLGLTAADIVDGPYRPDDVATGIRHVQIEANPNSYGYIGKTDIYLGDSALVADWFERPHYQFSRDFGAVTFMGNSYNFPDIDIRFAGPIQTITLNSRIKAVSIDTDRQYRAFESYPVNGTLVAHFNNGVMKEIVGNRGETSYDENGILLDIMPDLPSFMDNIHEDVRILKSYGNGNITYSTDYDVGKRKATSGLTYYVDNVAGNDQNDGQSEGKAFKSFNRALMATPAARIIMVKGTDVYYDANNGWTSSVNNRSLDVIGFGPKKPIFTATVNDLTWKQQSESMWYTDRIRLAAFVDMNNVTLAAGPVRMTAAKTLDDCRINQSTYYFDNVSGRTYVHLFDDRQPDDKVLGIMASNSGRTENGSTVYMENLQFQYTYRGFQTEITQAKVVGYLYAKNCDFGWSWTDAGLNSWGTNVVTQGCTAQWCQRGGFRYNSDRVTPTMGIKPWVVEIGAVVKQCGFDGTGQGVGSGISGNVTIMRIGGSYSDCEGNFVQDTGDNTYSLNLSLTTFKSRWNNPDAAAYTNGLNSVRAAVAHYWSCTMDSSALSIYPKGKGQAFLHNTLVGARPCYQRETPYRFIYTKKG
Physico‐chemical
properties
protein length:683 AA
molecular weight: 75516,42580 Da
isoelectric point:5,80476
aromaticity:0,11127
hydropathy:-0,37028

Domains

Domains [InterPro]
IPR057701
STR
1–146
IPR057701 DC_1219
DC_0675
STR
1–156
DC_0675
YP_009849304.1
1 683
Architecture
STR
STR
STR 1-156 | STR 320-669 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009849304.1
1 683
Domain Start End Length (AA) Confidence
N-terminal 1 109 109 0,9228
Central domain 110 672 564 0,9632
C-terminal 673 683 10 0,3908
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-109
Central
110-672
C-terminal
673-683

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage Moabite
[NCBI] 		2587814 Uroviricota > Caudoviricetes > Chimalliviridae > Moabitevirus moabite >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009849304.1 [NCBI]
Genbank nucleotide accession
NC_048792.1 [NCBI]
CDS location
range 198309 -> 200360
strand +
CDS
ATGGTTGACTTAACCAAAGACGCTAAACTCATTGCGATTGACCTCATCAATGAAGCTAACGGAACTAACTTTACCGATAAAACTATCGCGTTGTCAGGGCCGGTTGTAAACAACTTCGTGTTGAACGGTCTGAATACGGAAGTTACTGCTTCGCCTAACGCAGGTGATAGCAATGACATTCCGGTAACTACTTATTATTCCCGTCTCCATCTGAACCATTTGTTGGAGCGTCCTTACGCCGCCTTAGAGAACCAAGCACCTTCTCGCCTGGCTGGTTTACTTCCTTCTATCAACGCTAAATATCGCCTCGGTCTGACCGCTGCAGATATCGTTGATGGCCCGTATCGTCCTGACGATGTAGCGACTGGTATTCGTCACGTTCAGATCGAAGCTAACCCGAACAGTTACGGTTACATCGGTAAGACTGACATCTATCTGGGTGATAGCGCTCTGGTAGCCGATTGGTTTGAACGTCCTCATTATCAGTTCTCTCGTGACTTCGGCGCAGTTACCTTCATGGGTAACAGCTATAACTTCCCTGATATCGATATCCGATTCGCTGGCCCTATTCAGACTATTACTCTCAATAGCCGGATCAAAGCTGTGAGCATCGATACTGACCGCCAATACCGTGCTTTCGAAAGCTACCCGGTAAACGGTACGTTGGTTGCGCACTTCAATAACGGCGTGATGAAAGAGATCGTTGGTAACCGTGGCGAAACGAGCTACGATGAAAACGGTATTCTTCTGGATATCATGCCGGATCTCCCTTCCTTCATGGACAACATCCACGAAGATGTACGCATCCTCAAATCGTACGGTAACGGGAACATTACCTACAGCACCGACTACGACGTAGGTAAGCGAAAGGCAACTTCTGGTTTGACTTACTACGTTGATAACGTAGCAGGTAACGATCAGAACGATGGTCAGTCGGAGGGTAAAGCATTCAAGTCGTTTAACCGTGCATTGATGGCAACTCCTGCTGCCCGTATCATCATGGTCAAAGGGACGGATGTTTATTACGATGCCAACAACGGCTGGACGAGTTCAGTTAATAACCGTTCTCTGGACGTCATCGGCTTCGGCCCTAAAAAGCCTATCTTCACGGCGACCGTAAACGACCTCACCTGGAAACAGCAAAGTGAGTCCATGTGGTATACCGACCGTATCCGTTTGGCTGCCTTCGTTGACATGAACAACGTAACGCTGGCCGCTGGCCCAGTCCGTATGACCGCTGCTAAGACGCTGGACGACTGCCGTATCAACCAGTCTACCTATTACTTCGACAACGTGTCTGGTCGTACTTACGTTCACTTGTTTGACGATCGTCAACCAGATGACAAAGTTCTGGGTATCATGGCAAGTAACTCTGGTCGTACCGAGAACGGGTCTACTGTTTACATGGAAAACCTTCAGTTCCAGTACACTTACCGTGGCTTCCAGACTGAAATCACTCAGGCTAAAGTAGTCGGGTATCTGTACGCTAAGAACTGCGACTTCGGCTGGAGCTGGACTGATGCCGGCCTTAACAGCTGGGGTACTAACGTTGTTACTCAGGGCTGTACTGCTCAGTGGTGTCAGCGCGGCGGTTTCCGTTATAACTCAGACCGCGTAACTCCAACCATGGGTATCAAACCTTGGGTTGTTGAAATCGGCGCAGTTGTTAAGCAGTGCGGTTTCGACGGCACTGGTCAGGGCGTAGGTTCCGGTATCTCCGGTAACGTAACTATCATGCGTATTGGCGGTAGCTATTCTGATTGCGAAGGTAACTTCGTTCAGGACACCGGTGACAATACCTACTCGCTCAACCTGAGTTTGACTACGTTTAAATCTCGGTGGAATAACCCAGATGCGGCCGCGTACACTAACGGCCTGAACTCAGTGCGTGCAGCAGTTGCACATTACTGGAGCTGCACTATGGACAGCAGCGCTTTGTCTATCTATCCGAAAGGCAAAGGTCAAGCGTTCTTGCACAACACGTTAGTAGGTGCACGTCCCTGCTACCAGCGCGAAACGCCGTATCGTTTTATTTACACTAAGAAAGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9f6b626e88ae72d0ecf2f6a16d34054788987b46e11f6a950e82222be7f5fa86
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6846
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50