Protein

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Genbank accession
URQ02803.1 [GenBank]
Protein name
putative tail or base plate protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDLKKWQDPLMNSELQQNYNDNLVKLAGSLEKANQDMTHVNQRISNLVIKSGGNESNEVVDARVSSLVPETEFTTLNDRINYAENALITGVGKLSTNVFDLMDKYNDIDTILKRLYGLDSSNIEIFVDDARGDDIAGTGEIDAPFKTINKAVMTLPRVLNSNSVNIWIVPGRYNEDVVIPPIMGGDIYIRSTNFETVDPTSSTGCQVRSISATGSNGYLYIAGLEETNTAGTTKNYFIKATRCGFVRITKCRMAFNTKAIDPFTAVFIDACSADVNGCYFASQNVDVRGYNTARVEVQNIVHGAKSAIGLYPQSADIFNLNSGTWEADTPTKLSGGGVVRT
Physico‐chemical
properties
protein length:341 AA
molecular weight: 37292,42260 Da
isoelectric point:4,89278
aromaticity:0,07918
hydropathy:-0,23636

Domains

Domains [InterPro]
DC_1253
STR
1–335
DC_1253
Coil
Unmapped
30–50
Coil G3DSA:3.30.1910.20
IPR011050
STR
124–301
IPR011050
URQ02803.1
1 341
Architecture
STR
STR 1-335 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
URQ02803.1
1 341
Domain Start End Length (AA) Confidence
N-terminal 1 159 159 0,8938
Central domain 160 330 172 0,9364
C-terminal 331 341 10 0,7726
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-159
Central
160-330
C-terminal
331-341

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage HB17054
[NCBI] 		2942418 Uroviricota > Caudoviricetes > Aquingentivirus >
Host Listeria monocytogenes ATCC 19115
[NCBI] 		176281 Bacillota > Bacilli > Caryophanales > Listeriaceae > Listeria > Listeria monocytogenes

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URQ02803.1 [NCBI]
Genbank nucleotide accession
ON456151 [NCBI]
CDS location
range 13154 -> 14179
strand +
CDS
ATGGATTTAAAAAAATGGCAAGACCCACTCATGAACTCAGAACTACAGCAAAACTATAACGATAATTTAGTAAAACTAGCTGGAAGCCTTGAAAAAGCTAATCAAGATATGACACATGTTAATCAGCGCATATCTAACTTAGTTATTAAATCCGGCGGGAATGAATCGAACGAAGTAGTAGACGCACGCGTTTCTTCTCTGGTTCCAGAAACTGAATTCACAACATTAAACGATAGAATAAATTACGCGGAAAATGCTTTAATAACAGGTGTCGGAAAGCTTTCAACGAATGTTTTTGATCTAATGGATAAATACAACGATATAGATACTATTTTAAAGCGTTTATATGGCTTAGATAGCAGCAATATTGAAATATTTGTGGATGATGCAAGAGGCGATGATATTGCAGGAACTGGTGAAATTGATGCACCTTTTAAAACGATAAATAAAGCAGTAATGACTTTGCCCCGTGTATTGAATAGTAACTCTGTGAATATCTGGATTGTTCCTGGTCGGTATAATGAAGATGTCGTTATTCCGCCAATCATGGGAGGGGACATCTACATTAGGTCTACAAACTTTGAAACAGTAGACCCTACCAGTAGCACCGGATGCCAAGTTCGAAGTATTTCTGCGACAGGAAGTAACGGCTATTTATATATTGCTGGTTTAGAAGAAACGAACACGGCAGGCACAACGAAAAACTACTTCATTAAAGCGACGCGATGCGGATTTGTAAGGATTACAAAATGCCGAATGGCCTTCAATACTAAGGCAATAGACCCGTTCACTGCGGTTTTTATTGATGCTTGTTCTGCTGATGTCAACGGCTGTTATTTTGCCTCACAAAATGTTGATGTTCGCGGTTATAACACTGCTAGAGTCGAGGTTCAGAATATCGTCCATGGCGCAAAAAGTGCGATTGGTTTGTATCCTCAAAGCGCCGATATTTTCAATCTCAATAGCGGGACTTGGGAAGCTGATACGCCTACGAAACTGAGTGGCGGGGGAGTGGTTAGAACATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b5ef27eca909663c7263dcce2148805bc5e1b0fc3e0032555473e10ee0ac00ca
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8533
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50