Protein

View in Explore
Genbank accession
QHR69548.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MNLTRPNSAIADLVEATYRKRRSFEAGFTLRNSREVLLLAAEGNYYQWKGTFPKVVPANSTPATTGGISSLAWQSVGTADDIAIINAKFTAVQQQIDDLSETIPEAGKSAYQIALDNGFVGTEAQWLASLKGDTGAQLNIKGSLASTSELPSTGNVAGDGYIVGDVIYAWDGSVWKLISSLGPEGKSAYEVWLADGNTGSVYDFLTSIKGDKGDVGPTGPQGAPGVNANGFDYRGDLPSTSNLPQPNSENVSQAYSINGNLYVSNGTAWVNMGNIVGPQGPQGEAGKDGLDGTDGDEGKSAYQSWLDAGNEGTEVDFVASLKGEKGDKGDKGDPGPQGEQGVQGIQGPVGAGLSVNGELSDVSELPSVAEVGDAYIVKNDLYVWIDDNQTWLNVGSLGGRSITAKGHVANGEALPVYNNYGDAYLTEDTSNLYIYTYDQDTNSASFVDMGSIKGDKGEKGDKGEKGDPGANGTNGTNGTNGKDGAQWFVATTNPVAGDGVINDYAFNTTTGAVFKKTDSSTWTLIGTLPSIPEAPQDGLTYGRSDGNWIEISGSDPTEAITPTKVTAGFMELETTTANSGASWTPSGTSNMYVVTVTDALTVGAWPGVTGSTKPKAFSAMIYLIQDTTGHTVTLDASYGALNDTEIATTANAVTILQLTYPGVGDIVDMVVVTR
Physico‐chemical
properties
protein length:674 AA
molecular weight: 70233,01690 Da
isoelectric point:4,23328
aromaticity:0,08160
hydropathy:-0,33338

Domains

Domains [InterPro]
IPR040775
RBD
12–77
IPR040775 IPR050149 SSF58046 IPR058970
G3DSA:2.10.10.80
ATT
18–83
G3DSA:2.10.10.80 G3DSA:1.20.5.320 G3DSA:1.20.5.320
DC_1593
STR
20–674
DC_1593
QHR69548.1
1 674
Architecture
ATT
STR
ATT
STR
ATT 12-83 | STR 84-496 | ATT 497-552 | STR 553-674
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage nieznany
[NCBI] 		2696432 Uroviricota > Caudoviricetes > Stephanstirmvirinae > Phapecoctavirus nieznany >
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR69548.1 [NCBI]
Genbank nucleotide accession
MN850598 [NCBI]
CDS location
range 105314 -> 107338
strand -
CDS
ATGAATTTAACAAGACCTAATAGTGCGATAGCCGATCTGGTAGAAGCTACTTATCGAAAACGTCGCAGCTTTGAGGCAGGTTTTACATTACGTAATTCCCGTGAAGTTTTGCTGTTAGCAGCAGAAGGGAATTATTACCAATGGAAAGGAACTTTTCCTAAAGTAGTTCCAGCAAACTCTACGCCAGCCACCACAGGTGGTATTTCTTCCCTTGCATGGCAAAGTGTTGGGACCGCTGATGATATAGCAATTATCAATGCCAAGTTTACGGCAGTGCAGCAACAGATTGATGATCTGTCGGAAACAATACCTGAAGCTGGTAAATCGGCTTATCAGATCGCACTTGATAATGGTTTTGTTGGAACAGAAGCACAATGGCTTGCCTCTTTGAAAGGGGATACTGGTGCTCAACTTAATATTAAAGGATCATTAGCAAGCACTAGTGAACTACCATCTACAGGTAACGTTGCAGGGGATGGTTATATTGTAGGTGATGTGATTTACGCTTGGGATGGTTCTGTTTGGAAACTTATTTCTTCTCTTGGGCCAGAAGGTAAATCAGCTTACGAGGTATGGTTGGCAGATGGTAATACAGGGTCTGTTTATGATTTTCTTACCTCTATAAAAGGCGATAAAGGCGATGTTGGTCCTACAGGGCCACAGGGAGCACCTGGTGTTAACGCCAACGGTTTTGATTATCGTGGGGATTTGCCTTCTACAAGTAACTTACCACAACCTAACTCTGAAAACGTAAGCCAAGCTTATTCTATCAATGGCAATCTTTATGTCTCTAATGGGACAGCTTGGGTCAACATGGGTAATATTGTTGGTCCTCAAGGTCCACAAGGTGAGGCAGGTAAAGACGGTCTAGATGGAACAGATGGAGACGAAGGGAAATCTGCATATCAAAGTTGGCTGGATGCTGGTAATGAAGGGACAGAAGTAGATTTTGTTGCTTCCTTAAAAGGAGAGAAGGGGGACAAAGGAGATAAGGGAGATCCTGGTCCACAAGGTGAACAGGGTGTTCAAGGTATCCAAGGTCCGGTTGGTGCAGGTCTTTCTGTAAATGGCGAATTGTCAGATGTTTCAGAACTACCGTCTGTAGCGGAGGTTGGTGATGCCTACATTGTAAAAAATGACCTTTACGTGTGGATCGACGACAATCAAACGTGGCTCAATGTGGGTAGTTTGGGTGGTAGATCTATTACAGCTAAAGGTCATGTTGCAAATGGAGAAGCTCTCCCCGTTTATAATAACTATGGCGATGCTTATTTAACTGAAGACACCAGTAATCTTTACATCTATACTTATGATCAAGACACCAATTCCGCATCTTTTGTTGACATGGGGAGTATTAAAGGTGACAAAGGCGAGAAGGGAGATAAAGGTGAGAAAGGTGATCCAGGAGCAAACGGAACCAATGGTACTAATGGGACCAACGGTAAGGACGGCGCACAATGGTTTGTAGCAACAACTAATCCAGTCGCAGGAGACGGTGTTATCAATGATTACGCCTTCAATACTACCACTGGAGCAGTGTTTAAGAAAACAGATTCTTCTACGTGGACACTTATAGGAACTCTTCCTAGTATACCAGAAGCCCCTCAAGACGGCTTGACGTATGGTCGTTCTGATGGAAACTGGATCGAAATATCAGGATCAGATCCTACGGAAGCTATAACACCAACTAAAGTTACAGCAGGTTTCATGGAACTTGAAACAACTACTGCCAACTCTGGAGCATCTTGGACTCCTTCTGGAACTTCCAATATGTATGTTGTTACAGTAACTGACGCTCTGACAGTTGGAGCATGGCCTGGTGTCACTGGCTCTACAAAACCTAAAGCGTTTTCAGCAATGATTTATTTGATTCAAGATACAACGGGACACACGGTTACACTAGATGCGTCTTATGGAGCACTAAATGATACAGAAATAGCAACTACTGCTAACGCAGTAACAATTTTGCAATTAACGTATCCTGGTGTGGGTGATATCGTGGACATGGTTGTTGTAACACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
84f556036a002c53dd5e0a801d4a3e5e59ddca51a127c479626ec40e32a8779f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7623
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank