Protein

View in Explore
Genbank accession
QGH74239.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,81
Protein sequence
MDDKKLSPVNYQTPILDIQPYPYYLPTANDGSLTMLEKVNAIIYHLQYIDEIFKDIVDKWNELVKWLEDGMKKIIEDILAKWLEDGTIEELLKGALKDYVTRKELEQELSDLMDKITKQINEAIDALFIRESTTYTIGEGGDYPTLNKAVDALSEKIVANRGQITWKILKDHELKEQVFLEGLNLSYVTIISEDERVNVDTRYLTQDVEVKIDPEYTVTPIFYCKNGSLPNIGTIFDLCNCGDKVNACGAHLDNSDVRILSGAGFLNASYIGLSAVNGSSVVAHGGTVDNSGNRSQVVEGGSIPTRGDGFRIWNSTLSATYATANRCGDVGFNISQGSSAQLNSATATNCGHHNILITSGSQASARRGVFDDALDDCVTVYAGGALDARYASMLRGGASGIVVTRGSSANIEYAATSGKNGGIYANRASQVDAYGATADDSGTNAVTAGNASTVNFIQGSAKNAENDALHCTHGSTINAHQAVLTGAGRNGILAYAADVMANEANVSNAKNHGVEATRGSRIVLNRGKANDCGVRAALATQSTIDMSYAEALRAGQRAMEATQGGSIMAYSSNATGATEWGYAVYNGATISCVDATGTMNRDPNTLTNNGYILR
Physico‐chemical
properties
protein length:614 AA
molecular weight: 65637,30570 Da
isoelectric point:4,95326
aromaticity:0,06840
hydropathy:-0,23941

Domains

Domains [InterPro]
DC_0378
STR
45–375
DC_0378 DC_0504
Coil
Unmapped
102–122
Coil IPR011050
QGH74239.1
1 614
Architecture
STR
STR
STR 45-404 | STR 443-614
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QGH74239.1
1 614
Domain Start End Length (AA) Confidence
N-terminal 1 144 144 0,9914
Central domain 145 603 460 0,9966
C-terminal 604 614 10 0,2162
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-144
Central
145-603
C-terminal
604-614

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage vB_Bpu_PumA2
[NCBI] 		2662128 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus pumilus
[NCBI] 		1408 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QGH74239.1 [NCBI]
Genbank nucleotide accession
MN524845.1 [NCBI]
CDS location
range 12336 -> 14180
strand +
CDS
ATGGATGACAAAAAACTATCACCCGTTAACTATCAAACACCTATTCTAGACATACAGCCATATCCATACTACTTACCTACAGCAAATGACGGAAGTTTGACAATGCTTGAAAAGGTAAATGCTATCATCTACCATTTGCAATATATTGATGAAATTTTTAAAGATATTGTAGATAAGTGGAACGAACTAGTAAAATGGCTCGAAGATGGCATGAAAAAAATTATCGAAGATATTCTAGCTAAATGGCTCGAAGATGGCACTATAGAAGAATTACTAAAAGGTGCTTTAAAGGACTATGTAACTAGAAAAGAATTAGAGCAAGAACTATCTGATTTAATGGATAAAATTACAAAACAAATTAATGAAGCTATTGACGCTTTATTCATCCGTGAGTCTACTACTTACACAATTGGCGAAGGTGGAGACTATCCAACACTAAACAAAGCCGTTGATGCTTTAAGTGAAAAGATTGTTGCTAACCGTGGTCAAATTACTTGGAAAATACTAAAAGACCATGAGCTAAAAGAGCAAGTATTTTTAGAAGGTTTAAACCTATCTTATGTAACTATCATTTCAGAAGACGAAAGGGTAAATGTAGATACTAGATATCTAACCCAAGACGTAGAAGTTAAAATCGACCCTGAATATACTGTTACACCTATTTTCTACTGTAAGAATGGTTCACTACCTAACATTGGTACTATATTTGATCTATGTAACTGCGGTGATAAAGTCAATGCATGTGGTGCACATCTTGATAACTCCGATGTAAGAATTTTATCAGGTGCGGGTTTCCTTAACGCTTCATATATCGGCTTATCTGCCGTAAATGGTTCATCTGTAGTTGCTCACGGTGGAACGGTAGATAATTCAGGAAACAGATCACAAGTAGTAGAAGGTGGTTCTATCCCTACACGTGGTGACGGTTTCCGTATCTGGAATAGCACACTATCAGCAACCTATGCTACAGCTAATAGATGTGGAGACGTAGGGTTTAATATCTCTCAAGGTAGTTCAGCTCAATTAAACTCTGCTACAGCGACTAATTGTGGACACCATAATATCCTTATTACATCTGGTTCACAGGCTTCAGCTAGGCGGGGTGTGTTCGATGACGCATTAGATGATTGTGTAACAGTGTATGCGGGCGGCGCTTTAGATGCTCGATATGCTTCTATGTTAAGGGGTGGTGCTTCTGGTATTGTAGTTACCCGTGGTTCATCTGCGAATATCGAATATGCGGCGACTTCTGGTAAAAACGGAGGTATCTATGCTAACCGTGCTTCACAAGTAGATGCCTACGGTGCAACGGCTGATGATTCAGGCACTAACGCAGTAACAGCAGGTAACGCATCAACGGTTAACTTTATTCAAGGATCAGCCAAGAATGCGGAAAACGATGCCTTACACTGTACCCACGGTTCTACTATTAACGCACACCAAGCAGTGTTAACAGGTGCAGGACGTAATGGTATTTTAGCTTATGCGGCTGATGTAATGGCGAACGAAGCCAATGTATCAAATGCTAAGAATCACGGTGTTGAAGCTACACGTGGTAGTAGAATTGTCCTGAATAGAGGTAAAGCTAATGACTGCGGTGTACGTGCGGCGCTTGCTACACAATCTACTATAGACATGTCTTACGCAGAAGCTCTAAGAGCTGGACAAAGAGCAATGGAAGCGACCCAAGGTGGTTCTATTATGGCTTACTCGTCTAATGCTACAGGTGCTACAGAATGGGGTTACGCTGTTTATAATGGTGCTACAATCTCATGTGTAGATGCTACGGGCACAATGAACCGTGACCCTAATACTTTAACAAACAATGGATATATTTTAAGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
aa25c516cdfbf00343154487c26393df1989fadf375ddfd675f50fba89c2a8cd
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8580
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of two phi29 phages that infect Bacillus pumilis Batinovic,S., Rice,D., Beer,M. and Petrovski,S. 2022-11-28 — GenBank