Protein

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Genbank accession
YP_010053044.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MSVTEPGKIITPWAQSGLKNPIPPAANPATGRAGFDQGFSAINMTAKEAGGIPPFGQDFNGIFYEVTSILRYMQAGGQPTFDATLATAIGGYPKGAMVLGSDGVTLWQSKVDSNSTNPNVAPENWGTFDVGLKSDLAAPGGSNIVGFKQAGAGSVPRTSQDKMRERVTPLDFGAVGDGVTDDSVAIGRMITYFKSTLIPPAPGKNYDGRGVGLDFSGRNYGISSPVDFTGIDNLTVINPSLTALSGFAGNAMMVFNSIDTVWYVENTTIINPYLDGNWNANLCIDAADFLNFKIIGGKMTHYKQKGLLTRRINVGPHEVNMTGTFIFQREYNETFPVDITEGEAFEIGNYDNNFTNVVIGYQKKWTCTLASGANTFSNCHFYSGVTSWPESGVRSLDTADDFDGCYFDSVPLFIRDRSTISDCTFVIEPTKDFAIELTTLDPFLVKVTDCRFRKASGPAVVAIKMKTIADGRINRPSIYDNSFDGCESLQTRGLHPVNISATSTTFALPDQYQPLSSFGPVSLAASADGLFQERMFGQAYNSTTKQITINCYAVSGGTMIGSNLGGKQALINFN
Physico‐chemical
properties
protein length:574 AA
molecular weight: 61730,65130 Da
isoelectric point:5,00748
aromaticity:0,10627
hydropathy:-0,14547

Domains

Domains [InterPro]
DC_0156
STR
1–567
DC_0156
IPR012334
STR
131–527
IPR012334
IPR011050
STR
166–488
IPR011050
YP_010053044.1
1 574
Architecture
STR
STR 1-567 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010053044.1
1 574
Domain Start End Length (AA) Confidence
N-terminal 1 183 183 0,9942
Central domain 184 496 314 0,9913
C-terminal 497 574 77 0,9747
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-183
Central
184-496
C-terminal
497-574

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage 4_D05
[NCBI] 		2588099 Uroviricota > Caudoviricetes > Kunmingvirus >
Host Aeromonas rivipollensis
[NCBI] 		948519 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010053044.1 [NCBI]
Genbank nucleotide accession
NC_054466.1 [NCBI]
CDS location
range 40525 -> 42249
strand +
CDS
ATGTCGGTAACTGAACCTGGCAAAATTATTACCCCGTGGGCCCAGTCCGGCCTCAAAAACCCCATCCCGCCAGCAGCGAACCCGGCAACCGGCAGGGCTGGCTTCGATCAAGGTTTCTCAGCCATTAACATGACGGCCAAGGAGGCAGGTGGCATCCCCCCATTTGGCCAAGACTTCAACGGCATTTTCTACGAAGTGACCAGCATTCTGCGCTACATGCAGGCCGGGGGGCAGCCCACGTTTGATGCCACATTGGCGACAGCCATCGGCGGATACCCCAAGGGAGCAATGGTGCTTGGTAGTGATGGGGTGACGCTGTGGCAGAGCAAGGTTGACAGTAACTCAACTAATCCTAACGTTGCCCCGGAGAACTGGGGTACGTTTGATGTTGGGTTAAAATCCGATCTTGCTGCGCCAGGAGGATCCAATATAGTTGGATTTAAGCAGGCTGGAGCTGGGTCGGTTCCTCGCACATCTCAAGATAAAATGAGGGAGCGTGTGACGCCCCTAGATTTCGGGGCGGTGGGGGACGGGGTCACTGATGATTCTGTCGCCATCGGTCGCATGATAACGTATTTCAAATCAACATTAATCCCTCCTGCGCCAGGGAAAAACTATGACGGGAGGGGTGTTGGGCTGGATTTCTCTGGCAGAAACTACGGAATTTCCTCCCCAGTTGATTTCACTGGCATCGACAATCTGACGGTGATCAATCCTTCATTGACCGCGCTAAGTGGCTTTGCTGGTAATGCAATGATGGTATTTAACTCCATTGACACCGTGTGGTATGTAGAAAATACCACCATCATTAACCCTTATCTGGATGGCAATTGGAACGCAAACCTGTGTATAGATGCAGCTGATTTTCTTAATTTCAAGATTATCGGCGGCAAAATGACGCACTACAAGCAGAAGGGGTTGCTGACCCGGAGAATCAACGTTGGCCCGCACGAGGTTAATATGACGGGTACGTTCATATTCCAGCGGGAATATAACGAGACCTTCCCCGTTGACATCACTGAGGGTGAGGCTTTCGAGATAGGAAACTACGATAACAACTTCACCAATGTGGTGATTGGTTATCAGAAGAAGTGGACGTGTACGCTGGCGAGCGGCGCCAACACGTTCTCGAACTGCCATTTCTATTCCGGTGTAACTAGCTGGCCTGAAAGCGGCGTGCGCTCGCTGGACACGGCAGATGATTTCGACGGCTGCTATTTCGACTCTGTGCCTCTATTCATCAGGGACAGGAGCACTATTAGCGACTGCACTTTCGTTATCGAGCCTACCAAGGACTTTGCTATCGAGCTGACAACTTTAGACCCATTCCTAGTTAAGGTGACTGATTGCCGATTCAGAAAGGCCAGCGGGCCTGCCGTTGTGGCGATAAAAATGAAGACTATCGCAGACGGCAGGATCAACAGGCCTAGCATCTACGACAACTCATTTGATGGTTGCGAGTCATTGCAGACGAGAGGCCTCCACCCTGTAAACATCTCCGCCACCTCAACTACGTTCGCATTACCCGACCAATATCAGCCCCTGTCATCCTTCGGGCCGGTTAGTCTTGCCGCCAGTGCAGATGGGTTGTTCCAGGAGAGGATGTTCGGCCAGGCGTATAACTCGACCACAAAACAGATCACGATTAACTGTTATGCGGTATCAGGGGGCACCATGATCGGGTCGAACCTGGGTGGTAAGCAGGCGTTAATCAATTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c0016500cc7ccc33c4e13b4aab1bab2625aef71166a12b16eac33df00f724483
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8251
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Nine Novel Phages from a Plateau Lake in Southwest China Provide Insights into Aeromonas Phage Diversity Xiao,W. and Bai,M. 2019-07-05 — GenBank