Protein

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Genbank accession
ALP47353.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAKLGPTNVFGTLNVSSTAKVGSLVVDTELFAQNMQKVFHDAYHPNADKWTTARTLNLSGDASGSVSWDGSSDVTLNVTVADDSHTHETQYISKTQPYNDNILSGSIGGSDGKPLLQVNGASAYLGSTGRAGLQLATSTNPEWIGGGGAYKLFNDAYHPNADKWTNARTLTLSGDLSGSVSIDGSSNVTLSASVANDSHTHDGRYYTEDESDARFANVSGDTFTGDVYINSALMMRVGTTPAIQRADARSDDTNYSRLHWYGRTDTGATSNFRHAWYDGSDYINVSTSSSSVNFDRVSGTAIMRLQGNRVFADNYHPNADRWTTSRTLSLSGDATGSVSINGSSNVTLSVAVKNDSHTHDGRYYTESESNSRYVYKSGDTMTGELKLKAGSHAGASIKALDGGVNGTNLILTSGGNTVIASGETTAANAVTAGNTSENLHLGSDSTLYMYTNAQSWGSRKTFTLSTGGDFTAPGNITAYSDIRIKTDIKRILNPLEKIDSLNGYTYERTDIDGPRQTGVIAQEVIEVLPEAVVEQNNMYSVSYGNMVGLLIEGIKEEKRKREELEKRLEKLEKLLN
Physico‐chemical
properties
protein length:576 AA
molecular weight: 61895,94210 Da
isoelectric point:5,34829
aromaticity:0,07639
hydropathy:-0,49896

Domains

Domains [InterPro]
DC_1451
STR
4–111
DC_1451 DC_1451
DC_1451
STR
95–254
DC_1451 IPR005601 IPR030392 Coil
IPR030392
CHP
480–568
IPR030392
ALP47353.1
1 576
Architecture
STR
STR 4-575 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALP47353.1
1 576
Domain Start End Length (AA) Confidence
N-terminal 1 38 38 0,4020
Central domain 39 237 200 0,1889
C-terminal 238 576 338 0,8489
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-38
Central
39-237
C-terminal
238-576

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phi-ST2
[NCBI] 		1747714 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus
[NCBI] 		663 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALP47353.1 [NCBI]
Genbank nucleotide accession
KT919973.1 [NCBI]
CDS location
range 83884 -> 85614
strand -
CDS
ATGGCAAAATTAGGTCCTACTAACGTTTTCGGTACATTGAATGTATCGTCAACCGCTAAGGTTGGGAGTCTAGTTGTTGATACTGAACTTTTTGCCCAGAACATGCAAAAGGTGTTTCATGATGCCTATCACCCAAATGCAGACAAATGGACTACCGCTCGTACGTTGAATTTAAGCGGCGACGCGAGTGGTAGCGTCTCATGGGATGGTAGCTCAGATGTTACATTAAACGTCACAGTAGCAGACGACTCACATACTCACGAAACTCAATATATTAGTAAAACACAACCGTATAACGATAATATTCTAAGTGGGTCAATTGGCGGCTCAGATGGCAAACCGTTACTACAAGTTAATGGGGCTTCTGCGTATCTAGGCTCGACTGGGCGTGCAGGGTTACAATTAGCAACAAGCACCAACCCTGAGTGGATTGGTGGTGGGGGTGCATATAAACTTTTTAATGATGCCTATCACCCAAATGCAGACAAATGGACTAATGCACGAACATTGACATTGAGTGGTGATTTGAGTGGATCAGTATCTATTGATGGTAGTTCTAATGTCACGTTATCAGCTTCAGTTGCCAACGATTCACACACGCATGACGGTAGATATTATACTGAAGATGAATCTGATGCGCGATTTGCAAATGTATCAGGCGATACGTTCACTGGCGACGTTTATATAAACTCTGCATTAATGATGAGGGTAGGTACAACTCCTGCTATACAGCGGGCTGATGCTAGAAGCGATGATACTAATTACTCTAGATTGCATTGGTATGGTCGAACTGACACGGGTGCGACTAGCAACTTTCGACATGCTTGGTATGATGGGTCTGATTACATTAATGTCAGTACATCGTCTAGTAGCGTGAACTTTGACAGAGTTAGCGGAACTGCGATCATGCGTCTGCAAGGGAATCGCGTATTTGCAGATAACTATCACCCAAATGCAGATCGTTGGACTACATCTCGTACGCTGTCGTTGAGTGGTGATGCAACTGGTTCGGTTTCAATTAACGGTAGTTCGAATGTGACGTTAAGCGTCGCGGTTAAAAACGATTCTCATACGCATGACGGTCGTTATTACACAGAATCAGAATCAAACTCAAGATATGTGTATAAATCTGGCGATACGATGACAGGTGAATTGAAACTAAAAGCAGGTTCACACGCTGGAGCGTCGATTAAAGCATTAGATGGTGGTGTGAACGGCACGAACTTGATTTTAACGTCAGGTGGTAACACCGTAATTGCATCGGGTGAGACGACTGCGGCAAATGCTGTTACGGCTGGCAATACGAGTGAAAACTTACACTTGGGCTCTGATAGTACGCTTTACATGTATACTAACGCTCAGTCGTGGGGCAGTCGCAAGACGTTTACATTATCTACGGGTGGTGATTTTACCGCGCCGGGTAATATCACTGCGTATTCTGATATAAGAATAAAAACTGATATCAAGCGCATTCTAAACCCTCTTGAAAAAATTGACAGTCTGAATGGTTATACGTATGAGCGTACTGATATTGACGGGCCTCGTCAAACTGGTGTGATTGCTCAAGAAGTTATTGAAGTTCTGCCAGAAGCAGTTGTTGAGCAAAACAACATGTATTCTGTTTCATACGGAAACATGGTTGGGTTGTTGATTGAAGGTATTAAAGAAGAGAAACGAAAACGCGAAGAACTTGAAAAACGTCTAGAAAAACTAGAAAAACTACTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f1a44406367ab5a0bfc25823025f9a074428f84addd30d943380987309a0e4b7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6168
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50