Protein

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Genbank accession
YP_009613058.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLGQAFRATSGLDAAGEKLINVAMADKTILSDGVNVDFFHKYNTIYEYSSTRGYDAKHAVIFDRRIYYAKADIASPAGAFDVTKWTGLRVDPTWQFINSTGPALQLNSGQYITADNRFNNLVFNLPTSPIDGDTLVIKDVGGQPGVNDLEFVSTGTAVIEFKAASVGIRFRATVPFCQYMFVYKAAGNRWQVDITAASTNNYFVEPSVQGFQLQAGMVTWRHTAAGTIRLILPKYANHGDVITTHDIDGMNPINHSTLEIYPGSGHSINEAGVTKIESRTSGYGSFVFDLPSLTWEVWDGDQRTRIRVTKTDTAILPFEHILVTGNSNLPSQTTVLTLPEKVAIGDRVQITMDYLRKGQTCTIRVNPGSNELIVGSKAQMQFQRRSEYPMTNGWELVSSISISADTDYVPYVELMYAQLDPSLVGVTSSQYGWMIGNVQPKVERVDATRRDRLGVAALADQAEVNKNHEDNPNDETIVTPKTLANKTATETRRGIARLATTAEVNQLSTSTYFDDIIVTPKKLNERTATETRSGLAEIATQAETNGSTDDITIVTPKKLHNRIASETLTGILAVVSKNGTAGTTRSTAGTGVYNKADQSKAVTPLTLDEFKATETAKGIGYIATQAEVDGGSSDPLGPLLVTAERLGARRATESNHGLIEIATQAETNAGTDDTRAITPKKLNDRTSTETLTGIARLATTAEIDTATNDLTIVTPLKLKSRFDNTARISVNPADGLTQSGTIWSTVSVGIRLATEAQRGTLRVSTQIEANGSSSDDTIVTPKKLDGRKATRTLDGIIRVATTAEVRTGTATNLVVSPEDFKYMTQTEPTWSGNETRRGFVKTATVESTFVGNNNVGSTQAYTSYENDGLAVSPRGLNYALQNYLPLNATAQNALSLGGVVANDWVRRTVAQTVTGGMTFTAAMVAADITNATTTSSRVIIDNMSTNSVQIGKTRAGGANGITILAGSDAAINDWAFIAGGVGGSEVSGSEIAIATKVGSTFSSKLKVNRDGDVRIAQHIKSTAGFLVMENTGARIYLGGTELAVNQFAQSVAGGFTVGNASSTMAVLTSSDDAFTINGSPVINTANAQTKLNPTYLRRDGTSTMTGAMLLSNAGDNVKYLQFKNSNRYITSRGNDFVFGNTDTVNGRVCLDTNQNPIVKIGNFEYEIYHKGNKPTAQDVGAVDVSGSSANNLTIRDWIKIGNVKIVANNLTKTVEFIWEE
Physico‐chemical
properties
protein length:1220 AA
molecular weight: 131065,00490 Da
isoelectric point:5,96175
aromaticity:0,06885
hydropathy:-0,24656

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009613058.1
1 1220
Domain Start End Length (AA) Confidence
N-terminal 1 836 836 0,7880
Central domain 837 1035 200 0,1761
C-terminal 1036 1220 184 0,8517
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-836
Central
837-1035
C-terminal
1036-1220

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AS-gz
[NCBI] 		2026082 Uroviricota > Caudoviricetes > Pantevenvirales > Tulanevirus > Tulanevirus asgz
Host Aeromonas salmonicida subsp. salmonicida
[NCBI] 		29491 Bacteria > Proteobacteria > Gammaproteobacteria > Aeromonadales > Aeromonadaceae > Aeromonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009613058.1 [NCBI]
Genbank nucleotide accession
NC_042019 [NCBI]
CDS location
range 53527 -> 57189
strand +
CDS
ATGTTAGGACAAGCCTTTCGCGCCACAAGCGGCCTTGATGCAGCTGGCGAAAAACTCATCAACGTTGCAATGGCGGATAAGACAATCTTGTCCGACGGTGTAAACGTTGACTTTTTCCACAAATACAACACGATTTACGAATATAGCAGCACTCGTGGATATGATGCAAAACATGCTGTAATTTTTGATAGACGAATTTATTACGCGAAAGCAGATATTGCTTCCCCGGCTGGAGCTTTCGACGTCACTAAGTGGACAGGTCTGCGTGTCGACCCAACCTGGCAGTTCATTAATTCAACTGGGCCTGCGCTTCAGTTGAATTCTGGTCAATATATCACTGCCGATAATAGATTCAACAATCTAGTTTTTAACTTGCCAACGTCGCCTATTGATGGTGATACTTTGGTAATAAAGGATGTCGGCGGCCAGCCAGGTGTCAACGATCTGGAATTTGTATCTACTGGAACAGCTGTCATTGAATTCAAGGCGGCCAGTGTCGGCATTCGCTTCCGTGCAACTGTCCCGTTCTGTCAGTACATGTTCGTCTATAAAGCAGCTGGAAACAGATGGCAGGTAGATATAACAGCTGCATCAACAAACAACTATTTCGTTGAGCCGTCTGTTCAAGGATTCCAATTGCAGGCCGGGATGGTTACTTGGAGACATACTGCAGCAGGAACAATTCGCCTTATTCTGCCAAAGTATGCCAATCATGGTGACGTAATTACAACCCATGATATCGATGGGATGAACCCAATCAACCACTCAACTCTCGAAATTTACCCAGGCTCAGGCCACAGTATTAACGAGGCTGGTGTTACAAAAATTGAATCACGTACATCAGGTTATGGTTCATTTGTATTCGATCTTCCTTCTTTGACTTGGGAAGTATGGGATGGAGACCAAAGGACTCGTATTCGTGTCACCAAGACAGATACAGCTATATTGCCATTCGAACACATTTTGGTAACCGGCAATAGCAATTTGCCAAGTCAGACCACCGTGCTGACACTTCCAGAGAAAGTAGCTATAGGTGATCGTGTTCAAATCACTATGGATTATCTGAGAAAAGGTCAAACTTGTACAATTCGAGTAAATCCAGGTTCAAATGAGCTGATTGTTGGTTCGAAAGCTCAAATGCAGTTCCAACGTCGTTCGGAATACCCGATGACAAATGGGTGGGAATTGGTTTCATCTATTTCTATAAGTGCTGACACAGATTACGTTCCATATGTCGAGCTAATGTACGCACAGTTAGACCCGTCCCTGGTGGGTGTTACTTCTTCGCAATACGGATGGATGATCGGAAATGTTCAACCAAAAGTTGAACGTGTTGATGCAACTCGTCGTGATCGTCTGGGTGTGGCTGCTCTCGCGGATCAAGCAGAAGTAAACAAAAATCACGAAGATAACCCGAATGACGAAACTATTGTCACACCGAAAACATTAGCTAATAAAACTGCTACTGAAACTCGTCGTGGCATTGCTCGTTTGGCAACAACCGCTGAAGTTAATCAGTTAAGCACTTCAACTTATTTTGATGACATTATTGTCACTCCGAAAAAGCTGAATGAAAGAACAGCCACTGAAACTCGCAGTGGTTTAGCGGAAATTGCTACTCAAGCCGAAACAAACGGATCAACTGACGACATAACAATTGTGACTCCCAAAAAGTTGCATAATCGTATTGCGTCAGAAACTCTGACCGGTATCTTAGCAGTGGTTTCTAAAAATGGAACAGCTGGTACAACTCGCTCGACTGCCGGGACTGGTGTGTATAACAAAGCCGATCAGTCGAAAGCTGTCACACCGTTAACCCTGGATGAATTCAAGGCTACCGAAACAGCTAAGGGTATAGGTTATATTGCCACACAAGCGGAAGTCGACGGGGGATCATCTGATCCACTTGGGCCTTTGCTTGTAACAGCCGAGAGGTTGGGTGCTCGTCGAGCGACCGAATCAAACCACGGTTTGATTGAGATTGCAACACAGGCCGAAACAAACGCTGGAACTGATGATACACGTGCCATTACTCCCAAAAAGCTGAATGATCGCACTTCAACCGAAACTCTCACTGGTATTGCCCGTCTTGCCACTACGGCTGAAATAGATACTGCGACAAACGATTTAACTATCGTCACACCGTTGAAATTGAAGAGTCGTTTCGACAATACAGCAAGAATTTCGGTAAACCCAGCTGATGGTTTGACCCAATCTGGAACAATATGGAGCACTGTTTCTGTCGGTATAAGACTTGCAACCGAAGCCCAACGTGGGACATTGCGTGTTTCAACTCAAATCGAGGCAAATGGATCTAGTTCAGACGATACCATCGTAACTCCAAAGAAACTCGATGGAAGAAAAGCGACAAGAACCCTGGACGGTATTATCCGAGTTGCGACAACCGCTGAAGTTAGAACCGGAACAGCTACCAATTTGGTCGTTAGTCCAGAAGACTTCAAGTATATGACGCAAACTGAACCAACTTGGTCAGGAAATGAAACACGTCGTGGGTTTGTTAAAACAGCAACAGTAGAGTCAACTTTCGTTGGAAACAATAATGTCGGATCCACTCAAGCATATACAAGCTACGAAAACGACGGTTTGGCTGTTAGCCCTCGCGGATTGAACTATGCGTTGCAAAACTACCTGCCGCTGAATGCTACAGCACAAAACGCGCTGTCTTTGGGTGGTGTTGTTGCTAATGATTGGGTTCGTCGAACAGTTGCACAAACCGTAACAGGTGGAATGACTTTTACTGCTGCAATGGTAGCTGCAGATATTACTAATGCCACAACAACTAGCTCAAGAGTGATTATCGATAATATGTCGACAAACTCTGTTCAAATAGGTAAAACTAGAGCTGGTGGAGCTAATGGTATCACCATACTGGCTGGAAGCGATGCTGCAATAAACGATTGGGCATTTATTGCCGGTGGTGTTGGTGGTTCTGAAGTTTCTGGCAGTGAAATCGCTATTGCAACTAAAGTTGGTTCAACTTTCTCTAGTAAGTTGAAAGTTAATAGAGACGGTGATGTACGAATTGCACAGCATATAAAATCAACTGCCGGTTTCCTTGTTATGGAAAATACAGGCGCGAGAATTTATCTGGGTGGAACCGAATTAGCAGTGAATCAATTTGCGCAATCCGTTGCAGGTGGATTCACGGTTGGCAATGCTAGTTCGACAATGGCTGTATTGACAAGCTCTGATGATGCCTTCACAATTAATGGCTCACCAGTAATTAATACTGCCAATGCTCAGACAAAGCTCAACCCAACGTATCTTCGTCGTGATGGTACATCGACTATGACTGGAGCAATGCTTCTGTCAAACGCTGGTGACAATGTTAAGTATTTGCAATTCAAAAATTCAAATCGTTACATTACCTCTCGAGGAAATGATTTCGTCTTTGGAAACACCGATACAGTGAATGGTAGAGTTTGTCTCGATACAAACCAAAACCCAATTGTAAAAATCGGTAATTTCGAATACGAAATTTATCACAAAGGAAATAAACCTACAGCCCAAGATGTCGGAGCAGTTGATGTTTCTGGTTCGTCTGCAAACAACTTGACGATTCGTGATTGGATCAAAATTGGCAATGTGAAAATCGTTGCCAACAACTTGACCAAGACAGTTGAGTTTATCTGGGAAGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
daf68c0cfb10152326cc7bfbe749c1b2e3911b5a5a46254dd915f51f4eff9732
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5550
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
In vitro design and evaluation of phage cocktails against multidrug-resistant Aeromonas salmonicida Chen,L., Yuan,S. and Ma,Y. 2018-07-06 — GenBank