Protein

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Genbank accession
YP_007236480.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MADYSQLPIENIWSTGGDMVAPTPAQQQGGWGIQSVPRQWWNWKWNLHDTNLAYLLQKGIPEWTSTQEYIANKSFCTRGGFVYKAVRTHTGSDPATANPNWARAFADFTTSSSALGSLTPRDGGIPFFISATGASVFDSTAYGRGMLNVANAAAARNYISAQESSVVLSNLSTVTRAANTVPYFNTDTSMATFNITAFGRGLVNAANAENARGFLGLANSAIITADPANRAHTLVYRDAAGNFNAGVITATLSGNATTANKLRAPVTINGVAFDGSQNIVLPGLDTSYAGTVARLHINGANLSSADKTTQLALRNKSDTDWISLAVVDDNILQFVFRSATNPVVQIGNEVILHTGNQFSLGPTLTDARSRLGLDRLTQGSSDTQVFPSTLNNGPYLTVQPTAIGGFNGSTNGWLFRFDANGNMTHGTVPAARITGLSNSAQIPATTTAQANSLVQRDADGGFSAIAINAYGTIVGYGSNIFSRASGTGNAHIGFQRANGTELGLIWGAQSNNSMNFRVAGGSTAVSITGLDMTVTGRVNATTLNASGNVNATGNVNAGSATLNTAGNITGAAYGAYGSLTNWVDSVYAKKGEIPNDIARAGAAWDAVGQYILAGDQSGGSGGPGTIRAGNQLRPYSTISYTAGSLPAGSYRCMGAFAAGGNQITLWQRIS
Physico‐chemical
properties
protein length:670 AA
molecular weight: 69780,41320 Da
isoelectric point:8,90897
aromaticity:0,08657
hydropathy:-0,11507

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007236480.1
1 670
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,6007
Central domain 313 511 200 0,2595
C-terminal 512 670 158 0,8574
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-511
C-terminal
512-670

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaP1
[NCBI] 		685892 Uroviricota > Caudoviricetes > Vandenendeviridae > Pakpunavirus > Pakpunavirus PaP1
Host Pseudomonas aeruginosa PA1
[NCBI] 		1279007 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007236480.1 [NCBI]
Genbank nucleotide accession
NC_019913.1 [NCBI]
CDS location
range 42636 -> 44648
strand +
CDS
ATGGCTGATTACAGTCAACTACCTATTGAAAATATTTGGTCCACAGGCGGGGATATGGTAGCCCCGACCCCTGCGCAGCAGCAAGGCGGATGGGGTATTCAGTCGGTTCCTCGCCAATGGTGGAACTGGAAGTGGAACCTTCACGATACTAACCTAGCGTATTTGCTACAGAAGGGCATCCCAGAGTGGACTAGTACACAAGAGTACATTGCTAACAAATCGTTCTGCACTAGAGGTGGATTTGTTTACAAGGCTGTTCGTACCCATACAGGTAGCGACCCGGCCACCGCTAACCCCAACTGGGCCCGAGCTTTCGCAGACTTTACCACATCTAGCTCTGCACTTGGAAGCCTGACACCAAGAGACGGTGGAATCCCGTTCTTCATTAGTGCCACAGGAGCTAGCGTGTTTGACTCTACGGCTTATGGTCGTGGAATGTTGAATGTAGCTAACGCCGCAGCAGCCAGAAACTATATTTCGGCTCAAGAAAGTTCTGTTGTACTGTCTAACCTGTCCACTGTGACTAGGGCTGCCAACACAGTTCCGTACTTCAATACGGATACCTCCATGGCTACCTTCAACATCACAGCGTTCGGAAGAGGACTTGTCAACGCGGCTAATGCTGAAAACGCAAGAGGTTTCCTAGGCCTAGCTAACTCTGCTATCATCACAGCCGATCCAGCTAACAGAGCCCACACTCTGGTCTATAGAGACGCTGCTGGTAACTTCAACGCTGGTGTGATTACGGCCACCCTGTCTGGAAACGCAACCACAGCTAACAAGCTAAGGGCTCCAGTTACAATCAACGGTGTAGCATTCGACGGAAGCCAGAACATTGTTCTTCCGGGCCTAGATACAAGTTATGCTGGAACGGTTGCACGCCTCCACATCAACGGAGCAAACCTTTCGAGTGCAGACAAGACGACTCAGCTAGCATTGAGGAATAAGTCTGACACTGACTGGATTAGCCTCGCTGTAGTAGATGACAACATTCTGCAATTCGTGTTCAGAAGCGCTACAAACCCAGTTGTCCAGATTGGTAACGAAGTTATCCTTCACACAGGAAACCAGTTCTCTCTGGGCCCGACTCTTACAGACGCTAGGTCTCGTCTGGGTCTCGACAGACTCACTCAAGGTAGCTCTGATACTCAAGTCTTCCCCAGCACCTTGAACAATGGCCCCTACTTGACCGTACAACCTACGGCTATCGGAGGATTCAACGGTAGCACTAACGGATGGCTGTTCCGATTCGACGCTAATGGTAACATGACTCATGGTACAGTTCCTGCCGCTAGAATCACTGGTCTGTCCAACTCGGCTCAGATTCCAGCCACAACTACGGCGCAGGCTAACTCTCTTGTTCAGAGAGACGCAGACGGAGGATTCAGCGCTATTGCGATTAATGCGTATGGCACTATCGTCGGGTACGGCTCTAACATCTTCAGTAGAGCATCGGGCACTGGCAACGCCCACATCGGGTTCCAGAGAGCGAACGGAACAGAACTCGGTCTTATCTGGGGGGCCCAGTCTAACAACTCGATGAACTTCCGGGTAGCTGGTGGCTCCACCGCAGTGTCGATTACCGGTCTGGACATGACTGTTACTGGAAGAGTCAATGCTACCACACTAAACGCCTCTGGAAACGTGAATGCGACAGGCAACGTTAACGCCGGGAGCGCTACGCTCAATACAGCAGGGAATATCACAGGAGCCGCTTACGGAGCCTATGGTTCTCTGACCAACTGGGTTGATTCGGTATATGCCAAGAAGGGAGAAATTCCTAACGATATCGCAAGAGCCGGAGCCGCTTGGGACGCTGTAGGTCAGTATATTCTGGCGGGAGATCAATCTGGAGGCTCTGGCGGCCCGGGTACAATTAGAGCCGGGAACCAGTTGAGACCTTACTCTACGATCAGCTATACAGCCGGTAGCCTGCCCGCTGGCTCTTACAGATGCATGGGCGCGTTCGCTGCTGGCGGAAACCAGATCACTCTCTGGCAGCGCATTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4829d243fd8a4db29b426ddc441b38cc334274c996fa520935969167fb6a1bf2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6430
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50