Protein

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Genbank accession
YP_006560319.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTHEEQHANEMLSQIYDRVEAIDTTRHINRIYFHAGYSFEELVANLRGIVVTLVEEVGALDKRLDDVIAWLDTAISEKVTEEFKKQTPSMIETITEAVKDWVSDNLANQGSDWRDIGVLAYLPNNFPGIDSITKQMGQPWIYPNAFFEDDDYYYIQYMPGEFDASKVKSNLNTFVVWNKSDLSLRSVFWAGFGGTNGLYVEVINGKRYLYSKVNQEQYNLGRFDITDMPNAGAGPVEIPVDFEYSQSHIASEFTHYGDSWLVQQNMIPRGSDWDHTTLVSYNTDFTKKTGYYRQSKTAIGMTGTDYETKQLAFHPQALVVKDSNIIHLGGGLWRAGSPVTDYHAFGAVFNGANGELSADYTFSPEVMYNYFVSKGHTVPRIELEGGVVYKNRVHSIVIFNPLGDSAENPGIAVIEFQSKRRDIRGEQTTGNMTYLNKTGFASAYMPRNRDNKLYNAFTGADISNLMELVKYMRDAGQEEVNFSTSTVIMNDFDGTTMSSGYFVQIQNVNNRAFWLRYQHNAQNIEYTRFVQVNPDFTGVVHDNKQNLQTYEGWKELPLSNGAKGKVQYRRFNETVELSFADFQVTGTQVTVATLPEGYQPYAGTQFQLIQSRDNGGVVAEVSIQNDGDVIFTEPVIGTHAPENIYRGTLHLTMSSQLNL
Physico‐chemical
properties
protein length:659 AA
molecular weight: 74550,11080 Da
isoelectric point:5,01237
aromaticity:0,12291
hydropathy:-0,42580

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_006560319.1
1 659
Domain Start End Length (AA) Confidence
N-terminal 1 115 115 0,9917
Central domain 116 340 226 0,8574
C-terminal 341 659 318 0,6008
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-115
Central
116-340
C-terminal
341-659

Taxonomy

  Name Taxonomy ID Lineage
Phage Weissella phage phiYS61
[NCBI] 		1161906 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Weissella cibaria
[NCBI] 		137591 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006560319.1 [NCBI]
Genbank nucleotide accession
NC_018270.1 [NCBI]
CDS location
range 22333 -> 24312
strand +
CDS
ATGACACACGAGGAGCAACACGCAAATGAAATGCTATCACAAATTTATGACCGAGTTGAAGCGATCGATACTACCCGGCACATTAACCGAATTTATTTTCACGCCGGTTACAGCTTTGAGGAATTAGTTGCGAATTTAAGGGGGATTGTCGTTACCTTAGTTGAAGAAGTGGGCGCTTTAGACAAACGCTTAGACGATGTAATCGCTTGGTTGGATACGGCCATTTCTGAAAAAGTCACTGAGGAGTTTAAAAAGCAAACCCCAAGTATGATCGAGACGATTACTGAGGCCGTAAAAGACTGGGTTTCTGATAACCTTGCAAATCAAGGCAGTGATTGGCGAGATATTGGAGTTCTTGCATATTTGCCAAATAACTTCCCAGGGATCGATTCCATTACAAAACAAATGGGACAACCTTGGATTTACCCTAACGCATTCTTTGAAGATGATGATTATTACTACATTCAGTATATGCCTGGAGAGTTCGACGCGTCGAAGGTTAAAAGCAACCTGAATACGTTCGTTGTTTGGAACAAAAGCGACTTGTCTTTGCGTTCCGTATTTTGGGCTGGTTTCGGGGGCACGAACGGACTGTACGTTGAGGTTATCAATGGGAAACGCTATCTATATTCTAAGGTCAACCAAGAACAATACAACTTAGGCCGTTTTGATATTACAGACATGCCTAACGCGGGCGCAGGGCCAGTTGAAATCCCGGTTGATTTTGAGTATTCACAAAGTCATATAGCTTCGGAATTCACTCACTATGGAGACTCATGGCTCGTTCAACAAAACATGATTCCCCGAGGGTCAGATTGGGATCACACGACATTAGTGTCATACAACACAGATTTTACAAAAAAGACGGGTTATTATCGCCAAAGTAAAACCGCAATCGGTATGACTGGAACTGACTACGAGACAAAGCAACTTGCCTTCCACCCACAAGCATTGGTTGTTAAGGATAGCAACATTATTCACCTTGGGGGCGGACTGTGGCGAGCTGGGTCGCCTGTCACCGATTATCATGCCTTTGGGGCGGTTTTCAATGGGGCAAATGGGGAACTGTCAGCTGATTACACATTTTCGCCAGAAGTCATGTATAATTATTTCGTCTCAAAAGGACACACTGTCCCTCGAATTGAATTAGAGGGAGGGGTCGTCTACAAAAATCGCGTTCACTCGATTGTTATATTCAACCCCCTTGGCGACAGCGCCGAAAATCCTGGGATTGCTGTTATTGAGTTCCAATCAAAACGCCGTGATATTCGAGGAGAACAAACAACAGGCAATATGACTTACCTTAATAAAACAGGGTTTGCGTCGGCTTACATGCCTAGAAACCGAGATAATAAATTATATAACGCGTTTACTGGTGCGGATATTTCTAATCTTATGGAATTGGTTAAGTATATGCGGGACGCAGGCCAAGAGGAGGTAAACTTTAGTACGAGCACTGTGATCATGAATGATTTTGACGGAACTACAATGTCGTCGGGTTATTTTGTTCAAATTCAAAACGTGAACAACCGTGCATTCTGGTTGCGCTATCAACACAATGCCCAAAATATTGAATATACCCGCTTTGTTCAAGTGAACCCAGACTTCACGGGCGTAGTGCACGACAACAAGCAAAACCTTCAAACCTACGAAGGGTGGAAGGAACTACCGCTGTCAAATGGAGCTAAAGGTAAAGTTCAATATCGGCGATTTAATGAAACGGTAGAGCTTAGCTTCGCTGATTTTCAAGTTACAGGTACCCAAGTTACGGTCGCCACGTTACCGGAGGGGTACCAACCTTACGCAGGTACACAATTCCAGCTTATTCAATCTCGTGACAACGGTGGGGTTGTGGCGGAAGTGTCTATTCAAAACGACGGAGACGTTATTTTTACAGAGCCCGTAATCGGGACACATGCCCCTGAAAATATTTATCGGGGCACCTTGCACCTCACCATGAGTTCGCAATTAAATCTTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f97e0e870300f0f381d475defacf097831e8c01a82834e7b1ba728f4cced0fa9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6122
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50