Protein

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Genbank accession
CAB4182596.1 [GenBank]
Protein name
Pectate lyase superfamily protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTTKIKDVMRYIDRTAAEIASGVTPTLYQFGAGVPERYGAVGDGVTDDTAALTNCIAANYLTVLTPGKTYLTTGVVITASSRMIVGGGPNCAIKCSGAPGSFGIKFVHASGIGTHFQSGAILENFNVSCAATANQIYGIWMANAELRRMTGVLIDMSANTYAGVVRNATYGFRGSYQQDGVFVGCTFTGGSGANSDGCYLQSLSASELPNDNTFLGCRFQSCGGWGMRQQRGVGNVLIGGKFQANTSGGFLEGDDGAGNGGVSTTLYKVGFEVNTGDDLKVDVGSQISVRDCSFQSTGVTNSINALYLSGGVFDNNYGYNGKPAVFAAGTSVHWRDTNSGFAVNGAAGVLWETRVYAITYSATMATDASLGDHFSIGVTNASAMTISNPTNARDGMRLTYEIYNTSGGAMGAITWGANFRLAGAFTNPANNKRRTITFYPSTIAGTTYFIEESRAAADI
Physico‐chemical
properties
protein length:459 AA
molecular weight: 47965,94610 Da
isoelectric point:6,10794
aromaticity:0,10240
hydropathy:-0,02244

Domains

Domains [InterPro]
IPR012334
STR
35–263
IPR012334 DC_0562
IPR012334
STR
36–263
IPR012334
IPR011050
STR
37–330
IPR011050
IPR024535
ENZ
37–241
IPR024535
CAB4182596.1
1 459
Architecture
STR
RBD
STR 35-330 | RBD 360-459
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB4182596.1
1 459
Domain Start End Length (AA) Confidence
N-terminal 1 45 45 0,9404
Central domain 46 349 305 0,9866
C-terminal 350 459 109 0,9912
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-45
Central
46-349
C-terminal
350-459

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4182596.1 [NCBI]
Genbank nucleotide accession
LR797030 [NCBI]
CDS location
range 6473 -> 7852
strand -
CDS
ATGACCACTAAAATCAAAGACGTGATGCGGTATATCGACCGCACCGCTGCCGAGATCGCGTCGGGGGTTACTCCGACGCTGTACCAGTTCGGAGCCGGGGTGCCTGAGCGTTACGGCGCGGTCGGCGACGGTGTGACGGACGACACGGCTGCGCTGACAAACTGCATTGCCGCTAACTACCTGACCGTTCTCACCCCTGGCAAGACTTACCTCACGACCGGGGTGGTCATCACCGCTTCGAGCCGCATGATCGTCGGTGGCGGGCCGAACTGCGCGATAAAGTGCAGCGGGGCACCGGGTTCTTTCGGCATCAAATTCGTCCACGCTTCTGGTATCGGCACCCACTTCCAGTCTGGTGCGATCCTCGAGAACTTCAACGTCTCGTGCGCTGCGACGGCGAACCAGATCTATGGCATCTGGATGGCGAACGCCGAGTTGCGGCGCATGACCGGCGTGCTGATCGACATGAGTGCGAACACGTACGCGGGAGTGGTCCGCAACGCGACCTATGGGTTCCGCGGGTCCTACCAGCAGGACGGGGTCTTTGTCGGATGCACGTTCACGGGTGGCTCGGGCGCGAACAGCGACGGTTGCTACCTGCAAAGCCTGAGTGCATCGGAGCTGCCGAACGACAACACGTTCCTCGGCTGCCGGTTCCAGTCCTGCGGCGGATGGGGAATGCGCCAGCAGCGTGGCGTGGGCAACGTCCTCATCGGCGGCAAGTTCCAAGCCAACACCTCGGGCGGCTTCCTCGAGGGTGACGACGGTGCCGGCAACGGTGGCGTGTCGACCACCCTCTACAAGGTTGGCTTCGAGGTCAACACTGGGGACGATCTCAAGGTGGACGTCGGCTCGCAGATCTCCGTGCGCGACTGCAGTTTCCAAAGCACGGGCGTGACGAACTCCATCAATGCGCTCTACCTGTCCGGTGGTGTGTTCGACAACAACTACGGGTACAACGGAAAGCCCGCGGTGTTCGCCGCCGGGACTTCGGTCCACTGGCGCGATACCAATAGCGGATTCGCAGTCAACGGTGCCGCTGGCGTGCTGTGGGAGACCCGCGTCTATGCGATCACCTACAGCGCAACGATGGCGACAGATGCCAGCCTGGGGGACCACTTCTCGATCGGCGTGACCAACGCCTCGGCCATGACCATCAGCAACCCGACGAACGCTCGCGACGGAATGCGCCTCACCTACGAAATCTACAACACGTCAGGTGGCGCGATGGGGGCGATTACGTGGGGAGCCAACTTCCGACTGGCCGGCGCGTTCACGAACCCTGCCAACAACAAGCGCAGAACGATCACGTTCTACCCCTCGACGATTGCGGGGACGACGTACTTTATCGAAGAGTCTCGAGCAGCGGCGGACATCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f947c4d3229f9482eba855e2e23022504ba157ee6843e4a252555442df384ab7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8275
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50