Protein

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Genbank accession
XYS96948.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,70
Protein sequence
MSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLVAQHRGELYLFDERDGRLLMGQPLVHDYLKADDYRQLRAATVADDLFIANLSVKPEADRTDIKGVDPNKAGWLYIKAGQYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYPKVDPDANAATIAGYLNQRGVQDGYIAFRGDADIHVEVSTDMGNNYGIASGGMSLNATADLPALLPGAGTPGVGVQFMDGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWDEATDTYSLNELDYDRRGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGYLVFGTSTADEMICHQYLWQDNEKVQNAFHRWTLRHQIIGAYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVDGELELTKQHWDLIKDASAVYQLQPVAGAYMERTHLGVKRETNTKVFLDVPEAVVGAVYVVGCEFWSKVEFTPPVLRDHNGLPMTATRAVLHRYSVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQLNAGEPLVDSAVVPLPARVDMATSKFELSCHSPYDMNVRAVEYNFKSNQIYRRV
Physico‐chemical
properties
protein length:826 AA
molecular weight: 92062,78220 Da
isoelectric point:5,92481
aromaticity:0,10775
hydropathy:-0,33002

Domains

Domains [InterPro]
IPR058003
TTP
1–816
IPR058003
DC_0058
STR
1–826
DC_0058
XYS96948.1
1 826
Architecture
STR
STR 1-826
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYS96948.1
1 826
Domain Start End Length (AA) Confidence
N-terminal 1 139 139 0,9906
Central domain 140 338 200 0,2438
C-terminal 339 826 487 0,3130
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-139
Central
140-338
C-terminal
339-826

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeP_QSZH
[NCBI] 		3436856 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYS96948.1 [NCBI]
Genbank nucleotide accession
PV752214.1 [NCBI]
CDS location
range 13778 -> 16258
strand -
CDS
ATGAGCTACAAGCAATCCGCGTACCCCAACCTGCTGATGGGCGTGAGCCAGCAGGTGCCGTTCGAGCGCCTGCCAGGGCAGCTCAGCGAGCAGATCAACATGGTGTCGGACCCCGTGTCCGGCCTTCGCCGCCGTAGTGGTATCGAGTTGATGGCGCACCTGCTGCACACTGACCAGCCCTGGCCGAGGCCGTTCCTGTACCACACCAACCTGGGCGGTCGCAGCATTGCGATGCTGGTGGCGCAGCACCGGGGCGAGCTATACCTGTTCGACGAGCGGGATGGCCGCCTGCTGATGGGGCAGCCCCTGGTGCATGACTACCTCAAGGCCGACGATTACAGGCAGCTCCGGGCCGCCACGGTGGCTGACGACCTGTTCATCGCCAACCTGAGTGTGAAGCCCGAGGCCGACCGCACCGACATCAAGGGCGTAGACCCCAACAAGGCCGGTTGGCTGTACATCAAGGCAGGCCAGTATTCGAAGGCATTCTCCATGACCATCAAGGTCAAGGACAACGCCACCGGCACCACCTACAGCCACACGGCCACCTACGTGACGCCGGACAACGCCAGCACGAACCCCAACCTCGCTGAGGCGCCATTCCAAACGAGCGTAGGCTACATCGCGTGGCAGCTCTACGGCAAGTTCTTCGGTGCGCCGGAGTACACTCTGCCTAACTCGACGAAGAAGTACCCGAAGGTGGACCCGGACGCCAACGCGGCAACCATAGCCGGCTACCTCAACCAGCGTGGAGTGCAGGACGGGTACATCGCATTCCGGGGCGACGCCGACATCCACGTCGAAGTGTCCACGGACATGGGCAACAACTACGGCATCGCTTCGGGTGGTATGAGCCTCAACGCCACGGCAGACCTGCCGGCCCTGCTACCCGGCGCCGGTACTCCTGGCGTCGGCGTGCAGTTCATGGACGGCGCGGTCATGGCCACCGGCTCCACCAAGGCGCCCGTGTACTTCGAGTGGGATTCCGCTAACCGCCGCTGGGCGGAGCGGGCCGCCTACGGCACCGATTGGGTCCTGAAGAAGATGCCCTTGGCCCTGCGCTGGGACGAAGCCACCGATACCTACAGCTTGAACGAGCTGGACTATGATCGGCGGGGCTCCGGCGACGAGGACACGAACCCCACGTTCAACTTCGTCACCCGAGGCATCACCGGCATGACAACCTTCCAGGGTCGCCTCGTTCTCCTGTCGCAGGAGTACGTCTGCATGTCGGCCAGCAACAACCCGCACCGCTGGTTCAAGAAGTCGGCAGCCGCGCTGAACGACGACGATCCTATCGAGATCGCCGCTCAGGGTAGCTTGACCGAGCCGTACGAGCATGCGGTCACCTTCAACAAGGACTTGATCGTCTTCGCCAAGAAGTACCAGGCCGTGGTCCCAGGTGGTGGCATAGTGACCCCACGAACAGCCGTCATCAGCATCACCACGCAGTACGACCTCGATACCAGGGCGGCACCTGCCGTGACTGGACGCAGCGTGTACTTCGCTGCGGAGCGTGCCCTGGGTTTCATGGGCCTGCACGAGATGGCCCCGTCGCCGTCCACGGACAGCCACTACGTCGCCGAGGACGTTACCAGCCACATCCCGAGCTACATGCCGGGGCCGGCTGAGTACATCCAGGCGGCGGCCTCCAGCGGCTACCTGGTGTTCGGCACCAGCACGGCGGACGAGATGATCTGCCACCAGTACCTCTGGCAGGACAACGAGAAAGTCCAGAACGCCTTCCACCGATGGACGCTGCGGCATCAGATCATCGGCGCGTACTTCACCGGCGACAACCTGATGGTCCTGATCCAGAAGGGCCAGGAGATCGCCCTGGGCCGGATGCACCTGAACAGCCTGCCAGCCCGCGAGGGTCTGCAATATCCGAAGTACGATTACTGGCGGCGTATCGAGGCGACCGTCGATGGTGAGCTGGAGCTGACCAAGCAGCATTGGGACCTGATCAAGGATGCCTCTGCCGTATACCAGCTCCAGCCCGTGGCCGGTGCCTACATGGAACGTACCCACCTCGGCGTGAAGCGCGAGACGAATACGAAGGTGTTCCTCGACGTGCCCGAGGCCGTAGTCGGTGCCGTGTACGTGGTCGGCTGTGAGTTCTGGTCCAAGGTGGAGTTCACTCCACCGGTGCTACGGGACCACAACGGGCTGCCCATGACCGCGACCCGCGCAGTGCTCCACCGGTACAGCGTGAACTTCGGATGGACTGGCGAGTTCCTGTGGCGCATCAGCGACACGGCCCGCCCTAACCAGCCGTGGTACGACACGACGCCCCTGCGGCTGTTCAGTCGGCAACTCAACGCCGGCGAGCCACTGGTGGATAGTGCCGTGGTGCCGCTGCCGGCCAGGGTGGACATGGCCACGTCCAAGTTCGAGTTGAGCTGCCATAGTCCGTACGACATGAACGTCCGGGCTGTCGAGTACAACTTCAAGTCCAACCAAATCTACCGGAGGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ff0058e524308c85954a7b3192568c3a5b31c426ef730ae9dad8639fa9b18dea
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8824
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of a novel pseudomonas aeruginosa phage vB_PaeP_QSZH Zhang,L. 2024-11-16 — GenBank