Protein

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Genbank accession
XDJ15262.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGIYALDQDWTLVHEFDGNFVCARNIGVPAFGTDRGTVIAGPDWQEISVGAGRVWLTGQGAGFRVALHSGDRLETFAGTVNSLVSEGWSELNGLNITGCWYDSKNSRTVISGVFDDQPIFAVYKNGWTFNIVDLEAPAVSLADGYVLTHDAVYSTTDYSKFNLLHRFENFEAKTMVLV
Physico‐chemical
properties
protein length:178 AA
molecular weight: 19552,59310 Da
isoelectric point:4,60910
aromaticity:0,12921
hydropathy:0,01180

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XDJ15262.1
1 178
Domain Start End Length (AA) Confidence
N-terminal 1 95 95 0,4727
Central domain 96 167 73 0,8173
C-terminal 168 178 10 0,1813
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-95
Central
96-167
C-terminal
168-178

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage HRDY3
[NCBI] 		3236930 No lineage information
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XDJ15262.1 [NCBI]
Genbank nucleotide accession
PQ015379 [NCBI]
CDS location
range 247718 -> 248254
strand +
CDS
GTGGGGATTTACGCACTCGATCAAGACTGGACGCTTGTTCATGAGTTTGACGGCAATTTTGTGTGTGCACGGAACATTGGTGTTCCTGCATTCGGCACTGATCGGGGAACCGTGATTGCTGGCCCCGATTGGCAGGAAATTTCAGTCGGTGCCGGTCGCGTCTGGCTCACTGGGCAAGGTGCAGGATTCCGGGTGGCGCTACACAGCGGCGACCGCCTAGAAACTTTCGCAGGCACTGTGAATTCCCTTGTGTCCGAAGGCTGGTCAGAATTGAATGGGTTGAACATCACCGGTTGTTGGTACGATTCGAAAAACAGTCGTACCGTGATCAGTGGTGTGTTCGACGATCAGCCAATTTTCGCCGTGTACAAAAACGGTTGGACTTTCAACATCGTTGATCTTGAGGCCCCAGCTGTTTCGTTGGCAGACGGCTACGTGTTGACACACGATGCGGTCTACAGCACTACGGATTATTCGAAGTTCAACCTGCTACACAGGTTCGAAAACTTCGAGGCAAAAACCATGGTGTTAGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f7e1624d929653b9ce8bda813f34475f80f377a9120fc145477ab742b307aba5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7716
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50