Protein

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Genbank accession
AFM54650.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPQSLIQRTVNTFIKGLITEASELTFPENASVDELNCSLERDGTRRRRKAVTLEENNVLSDVVVPEGALVQTLDWPNVAGQLNLEFLVVQVNNNIYFYEKSTDPLSANKYAGSVDLNTYSASNNLSPSNERIQVTALNGYLIVASPAINTFYLEFDVNTEAFTAEVISFKERDFEWQGTDLEVTSEYFSDDSSPSAQRTYDAKNVGWGQGGGPATYTYPLTHAWYTGKDANGSFNITDWREIYTGSSLAANGHFVLNVFNKVRSGLTTEVETGRFRSVAAYAGRVFYAGIDSAKNGGKVYFSRLTERMADVGNCYQVNDPTSEVLSDLLDTDGGVVRIPDAHNIRKLHVLGASLLVFAENGVWAVAGVDNVFRATEYAITRISDVGLSNENSFIVADGIPIWWGKTGIYGVQQGESLSVPTAQNLSLGTIQTFWNSISNAKKAQVMVEYDKINQRVFWFYPDNEESIDYKYNNILIMDLALQAFYPWRVADESNGTSYIIGTSYYSGLGSTSTETQVVNGADTVVNGADSVVATLFRDYLEGDSEIKLLVRDGATGKMTFATFRGDTYLDWGTADYKSFAEAGYDFMGDVTTFKNAPYITTYMRVTEDGYTASGLGYEFINPSSCLMSVYWNLSKSHSTPREIYKLKDVPVVDPNDLSSINYPTDTVVTKSKVRGRGRSMKLRFESVAGKDFHLVGYEVIGAKNNNY
Physico‐chemical
properties
protein length:707 AA
molecular weight: 78287,07810 Da
isoelectric point:4,76580
aromaticity:0,11881
hydropathy:-0,27001

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFM54650.1
1 707
Domain Start End Length (AA) Confidence
N-terminal 1 166 166 0,7804
Central domain 167 390 225 0,3976
C-terminal 391 707 316 0,2638
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-166
Central
167-390
C-terminal
391-707

Taxonomy

  Name Taxonomy ID Lineage
Phage Celeribacter phage P12053L
[NCBI] 		1197951 Uroviricota > Caudoviricetes > Zobellviridae > Siovirus > Siovirus coreense
Host Celeribacter marinus
[NCBI] 		1397108 Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Celeribacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFM54650.1 [NCBI]
Genbank nucleotide accession
JQ809650 [NCBI]
CDS location
range 26390 -> 28513
strand -
CDS
ATGCCACAAAGTCTGATCCAGAGAACGGTTAACACCTTTATCAAAGGTCTTATCACTGAGGCCTCTGAGCTTACCTTCCCTGAGAATGCTTCCGTTGATGAGCTTAACTGTTCCCTTGAACGGGACGGTACACGCCGTAGACGTAAGGCCGTTACCCTAGAAGAAAACAATGTACTCTCGGACGTTGTAGTTCCTGAGGGTGCTTTGGTACAGACACTGGACTGGCCTAACGTAGCTGGTCAACTTAACCTTGAGTTCCTCGTCGTACAAGTAAACAACAACATCTACTTCTATGAGAAGTCTACGGACCCTCTGTCTGCTAACAAGTACGCAGGTAGTGTTGATCTTAACACATACTCTGCCTCTAACAACCTATCTCCTTCTAATGAACGTATCCAAGTAACTGCTCTTAACGGGTACTTGATTGTGGCTTCTCCTGCAATCAATACCTTTTACTTGGAGTTCGACGTAAACACGGAAGCCTTTACAGCTGAAGTTATCTCCTTCAAGGAAAGAGACTTTGAGTGGCAGGGTACGGACCTTGAAGTAACCAGTGAGTATTTTAGTGACGACTCTTCTCCTTCTGCACAACGTACATACGATGCTAAAAACGTAGGCTGGGGACAGGGTGGTGGGCCTGCTACATACACCTATCCTCTTACTCACGCTTGGTATACAGGTAAGGATGCGAACGGTTCCTTTAATATTACCGACTGGCGAGAGATTTACACTGGTTCATCCCTAGCTGCTAACGGTCACTTCGTTCTAAATGTTTTTAACAAAGTACGTTCTGGTCTTACAACAGAGGTTGAGACTGGGCGCTTCCGTTCTGTTGCAGCCTACGCTGGTCGTGTATTCTACGCAGGTATTGACTCAGCCAAGAACGGTGGTAAGGTTTACTTCTCTCGTTTGACAGAACGTATGGCCGATGTAGGTAACTGCTACCAAGTCAATGACCCTACATCAGAAGTACTAAGTGATCTACTCGACACAGATGGTGGTGTTGTCCGTATCCCAGATGCTCACAACATCCGTAAGCTTCACGTACTGGGTGCTTCCCTCTTGGTGTTTGCTGAGAACGGTGTCTGGGCTGTGGCAGGTGTTGATAACGTATTCCGTGCTACAGAGTATGCTATCACACGTATCAGTGACGTAGGTCTCTCTAACGAGAACTCCTTCATTGTAGCAGACGGTATCCCTATCTGGTGGGGTAAGACAGGCATCTACGGTGTTCAACAGGGTGAGAGCCTTTCCGTACCTACTGCACAGAACCTGTCCCTTGGTACTATCCAGACATTCTGGAATAGTATCTCGAATGCTAAGAAGGCACAGGTTATGGTTGAGTATGATAAGATCAACCAACGTGTCTTCTGGTTCTACCCTGACAATGAAGAGAGTATTGACTACAAGTATAACAACATCCTCATTATGGACTTGGCACTACAAGCCTTCTATCCTTGGCGAGTTGCCGATGAGAGTAATGGTACTTCATACATTATAGGTACTTCCTACTACAGTGGTCTTGGTTCTACCTCAACTGAAACACAGGTAGTGAACGGAGCAGATACAGTTGTCAACGGTGCAGACAGTGTTGTTGCTACTCTCTTCCGTGACTACCTTGAGGGTGACAGTGAGATCAAACTACTTGTAAGAGATGGTGCTACGGGTAAGATGACCTTTGCTACCTTCCGTGGAGACACCTACCTTGACTGGGGTACTGCAGACTACAAGAGCTTTGCAGAGGCTGGCTATGACTTCATGGGTGACGTTACTACATTTAAGAATGCTCCCTACATCACCACATACATGAGAGTAACAGAGGATGGTTACACAGCTAGTGGTCTTGGGTATGAGTTCATTAACCCTTCCAGCTGTTTGATGTCTGTGTATTGGAACCTCTCGAAGAGTCATAGTACTCCAAGAGAAATCTACAAGCTAAAGGATGTACCTGTTGTTGACCCTAACGATCTATCCTCTATCAACTACCCGACAGACACAGTAGTAACTAAGTCTAAGGTACGTGGACGAGGTAGATCAATGAAACTTAGGTTTGAAAGTGTTGCAGGTAAAGACTTCCACCTAGTAGGTTACGAGGTAATCGGTGCTAAAAACAACAACTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
339eb88a4194132258607d5c16b98c4b4cf9b894875f977f6839c14c91f8c616
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7303
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Celeribacter Bacteriophage P12053L Kang,I., Jang,H., Oh,H.M. and Cho,J.C. 2012 22787270 GenBank