Protein

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Genbank accession
XNZ85491.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MHFRLFNKPAAFGIDQGKPRMWIDGIYEDYDAGDPYEGRVQIHGSVGLMKVEILGGNLPPNASVFIDQMTKEVVVKWLKYTPPTIKVTEVPNGSFEDNSIWETIGPGTPATAEQGWSPNGKGNLTYRDQKGEYTVFGGWAPVTNRTRQIEITGKVEHGKSSKGNASCGVGLAWYNDKRELVRIDMDSIVDNGGKGNWYKTSGIYSAHEPEIRFVRPVIRFNRKKQNHPIHAGQIEWDHVYEIGYNEDETLWVEVKVTDSTHNVAIHRGIIEENNIWLTSRPYPLIVTDASATDYTYTHAFLKEQVWEEGEDVSTSGFEGFSAQLKSVVMDHAFPDNSSTEIGFSLVLKEVLRDYGLSDATTTGVSMTVDSKRIAVDPGVEYTDSITEINFGATLNAI
Physico‐chemical
properties
protein length:397 AA
molecular weight: 44319,94300 Da
isoelectric point:5,11548
aromaticity:0,10327
hydropathy:-0,45592

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNZ85491.1
1 397
Domain Start End Length (AA) Confidence
N-terminal 1 178 178 0,4951
Central domain 179 377 200 0,1971
C-terminal 378 397 19 0,9356
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-178
Central
179-377
C-terminal
378-397

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage SBP7phi1
[NCBI] 		3162017 Viruses > unclassified bacterial viruses >
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNZ85491.1 [NCBI]
Genbank nucleotide accession
PQ492162.1 [NCBI]
CDS location
range 13552 -> 14745
strand -
CDS
ATGCACTTCCGTTTGTTCAACAAGCCCGCTGCCTTCGGCATTGACCAAGGTAAGCCGCGCATGTGGATCGACGGGATTTACGAAGACTACGACGCAGGCGATCCTTACGAGGGCCGCGTGCAGATTCACGGCTCCGTGGGTTTGATGAAGGTGGAGATTCTGGGCGGTAACCTGCCGCCCAACGCCTCTGTCTTCATTGACCAGATGACTAAGGAAGTCGTGGTCAAGTGGTTGAAGTACACCCCGCCGACCATCAAGGTCACCGAAGTACCCAACGGTTCCTTCGAGGACAACTCGATCTGGGAAACTATCGGCCCCGGTACGCCTGCAACAGCAGAGCAAGGCTGGAGCCCCAACGGTAAGGGCAACCTGACGTACCGTGACCAGAAGGGAGAGTACACCGTATTCGGTGGCTGGGCACCAGTGACCAATCGCACGCGCCAGATCGAGATTACCGGCAAGGTAGAGCACGGGAAGTCCTCTAAGGGGAACGCATCCTGCGGCGTCGGCCTCGCGTGGTACAACGACAAGCGCGAACTCGTGCGTATCGACATGGACAGTATTGTCGATAACGGGGGCAAGGGCAACTGGTACAAGACCAGTGGCATCTACTCCGCACACGAGCCTGAGATTCGCTTCGTGCGTCCGGTCATCCGGTTCAACCGCAAGAAGCAGAACCATCCGATCCACGCTGGTCAGATCGAATGGGACCACGTATACGAGATTGGCTACAACGAGGACGAAACCCTGTGGGTCGAAGTCAAGGTCACGGACTCCACGCATAACGTTGCGATCCATCGCGGCATTATCGAGGAGAACAACATCTGGTTGACCTCTCGTCCGTATCCGTTGATCGTGACGGACGCCTCGGCTACGGACTACACGTACACCCACGCCTTCCTGAAGGAACAGGTATGGGAAGAGGGCGAGGACGTATCTACCTCGGGCTTCGAGGGGTTCTCTGCACAGCTGAAGTCCGTCGTAATGGATCACGCGTTCCCTGACAACTCTTCTACCGAGATTGGTTTCAGTCTCGTTCTGAAGGAAGTCCTCCGGGATTACGGCCTGTCTGACGCCACAACCACAGGTGTATCAATGACTGTGGACTCCAAGCGGATCGCTGTTGATCCGGGCGTGGAGTACACCGACTCGATCACCGAAATTAACTTTGGAGCAACGCTCAATGCGATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
79b422b57bd37836e8f3ee40c790a76d5c359ee3acb803295ec239243d1825c8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5952
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Enhanced Suppression of Stenotrophomonas maltophilia by a Three-Phage Cocktail: Genomic Insights and Kinetic Profiling Monsibais,A., Tea,O., Ghatbale,P., Whiteson,K.L. and Pride,D. — — GenBank