Protein

View in Explore
Genbank accession
XLY82083.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDQDTKTIIQYPTGSDEYDIPFDYLSRKFVRVSLVSDTQRLLLDNITDYRYVSRTRVKLLVSTDGYSRVEIRRFTSASEMVVDFSDGSVLRATDLNVSALQSAHIAEEARDLFSTSLSIGQLSYFDAKGLQIKNVAQGVDNTDAATVQQLNKIIADVVTTIPDSVAGNVRGLWARVLGDIGITLVDGSFESGATITTRTQALWSISGRKCYTWAGALPKVVPENSTPESTGGISETAWVDSSSKALGVLLTGPSGAARVGLKQGGTVQDAINWLTLDSFNIVKDGSKDVTADIMAACVVANDLGLDIKQNDGTYLVSGNPVWPVYNSLDLNGVTLKLAAGFTGYFALTQKDSTTVYGPTSPIVQAINAAGGRTAGSGVLEGLVNSTELNGKFLFMEGADVLYYSRGTAKYWWANTYLSNRGKLSDNLKYGVSAITKITAVTPRTKIVYYRLPNLDFGNGPANNGVIRVLNNTRFIMQGGSISNRPLKDVSKSPVIISLNYCASFKAYDFFDPYPAFAVNANDSLVYSYTLNFNDIADAVFENFNSQGYGWGVVGGQRSTNITYRDCNLNRVDMHDPYMGYLKVLDTRLGTWGINASGMGDMYLERVTVDLDDSAHGGYREHEGIINARGDFGGFHDGGLYIKDLTIVGEASAFEAASGHPVALVSAYSFNASLAYIPESSPVTPWGFKEVIVEGLHCPFKRTGRRFNSIISAPSIQFTVYHPMRVKLEDCNFNSTAFEKFDLRGWRVTPYNPSKVGIANTLAFRPTNFVDVKDCSMVGLEFTRPLSAYDYSNFDVNLVNVKNVEEHSLSPFTLYTNQCGRYNLVGCGLQQIVDKSMTTGERANRRSTFSVTGGTWNSLSGNPTDITYGNGYDIPVVATGVMFVGPYSQTEVTGANLNVAEFVQASGCKFLSSGPTYIQPLLWSGAAGPTGASANFNVARGNTLGLNISAVNGETSQVIAATLMIPQGFSTGQASGTTYGFSVAKNINYQLGLNARSLKANVGLVSCSDTITGVYLNA
Physico‐chemical
properties
protein length:1017 AA
molecular weight: 109856,10820 Da
isoelectric point:5,68114
aromaticity:0,10226
hydropathy:-0,08722

Domains

Domains [InterPro]
DC_0778
STR
1–676
DC_0778 DC_1183
IPR005604
ATT
14–126
IPR005604 G3DSA:2.10.10.80
IPR040775
RBD
186–241
IPR040775
XLY82083.1
1 1017
Architecture
STR
ATT
STR
ATT
STR
RBD
STR 1-13 | ATT 14-126 | STR 127-181 | ATT 182-241 | STR 242-676 | RBD 698-998 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLY82083.1
1 1017
Domain Start End Length (AA) Confidence
N-terminal 1 289 289 0,9959
Central domain 290 913 625 0,9949
C-terminal 914 1017 103 0,9868
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-289
Central
290-913
C-terminal
914-1017

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_Kp_AttikonH3
[NCBI] 		3243734 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLY82083.1 [NCBI]
Genbank nucleotide accession
PP978612.1 [NCBI]
CDS location
range 33638 -> 36691
strand +
CDS
ATGGACCAAGATACTAAAACAATTATCCAGTACCCCACAGGTAGCGACGAATACGATATCCCCTTCGACTACCTGTCGCGTAAGTTTGTCCGTGTGTCTCTCGTGTCGGACACCCAGCGTCTCTTACTGGATAACATCACAGATTACCGATACGTCTCCAGAACGCGCGTTAAGCTGCTGGTCAGTACCGATGGGTATAGCCGTGTAGAGATTCGACGCTTCACGTCAGCATCCGAGATGGTAGTGGACTTCAGCGATGGGTCCGTTCTCCGCGCGACCGACCTCAATGTGTCAGCTCTACAGTCTGCACACATCGCAGAGGAGGCTCGTGACTTATTCAGCACATCCCTGAGCATTGGCCAACTTAGCTACTTTGACGCTAAAGGTTTACAGATAAAGAACGTAGCGCAGGGTGTTGACAATACCGATGCAGCAACCGTTCAGCAGCTCAACAAGATAATCGCTGACGTCGTGACAACCATCCCTGACAGTGTGGCAGGTAACGTCCGGGGCCTTTGGGCCAGAGTTCTGGGCGACATCGGAATCACGCTTGTCGACGGTAGCTTCGAGTCCGGTGCGACCATCACCACCAGAACCCAAGCACTGTGGTCCATAAGCGGTCGCAAGTGTTATACGTGGGCTGGCGCACTGCCTAAGGTTGTCCCCGAGAACTCTACCCCAGAGTCTACGGGCGGTATTTCCGAAACGGCGTGGGTGGATAGTTCCTCCAAGGCCCTCGGTGTACTTTTGACTGGACCATCGGGAGCTGCGCGCGTCGGTCTCAAGCAGGGCGGTACCGTTCAGGACGCCATTAATTGGCTGACGCTCGACTCATTCAACATCGTGAAGGATGGCTCAAAGGACGTCACAGCTGATATTATGGCAGCGTGCGTTGTAGCCAACGACCTCGGGCTGGACATTAAGCAGAACGATGGGACATACCTAGTGTCTGGGAACCCTGTGTGGCCTGTGTACAACTCTCTTGACCTCAACGGGGTGACGCTGAAATTGGCTGCGGGTTTCACTGGATACTTCGCGCTGACCCAGAAGGACTCCACAACGGTTTACGGACCAACTAGTCCTATCGTTCAGGCCATCAATGCGGCTGGTGGTCGGACAGCTGGTTCAGGTGTTCTGGAAGGTCTGGTGAACTCTACCGAGCTGAATGGGAAGTTCCTGTTCATGGAGGGCGCTGATGTCCTTTACTACTCCCGAGGAACCGCTAAGTATTGGTGGGCGAACACCTACCTGTCAAACCGTGGGAAACTGAGTGACAACCTTAAGTATGGCGTATCGGCTATCACGAAGATAACTGCGGTCACCCCTCGCACGAAGATTGTCTACTATCGTCTACCTAATCTGGACTTTGGCAATGGCCCTGCGAACAACGGCGTGATTCGAGTACTGAACAACACTCGGTTCATTATGCAAGGCGGCTCAATCTCCAACCGACCACTTAAGGATGTGTCAAAGAGTCCGGTAATAATCAGCCTAAACTACTGCGCGTCCTTCAAGGCGTATGACTTCTTCGACCCGTACCCTGCTTTTGCGGTCAATGCCAACGACTCACTTGTCTACTCCTACACCCTGAACTTCAACGACATCGCCGACGCTGTGTTCGAGAACTTCAACTCTCAGGGGTATGGCTGGGGTGTGGTTGGAGGGCAGCGCTCTACCAACATAACCTACCGTGACTGTAACCTTAACAGGGTGGACATGCACGACCCTTACATGGGGTACCTGAAGGTCCTTGATACCCGCTTGGGTACTTGGGGCATAAACGCTTCAGGCATGGGTGATATGTACTTAGAGCGCGTCACTGTTGATTTGGACGATTCTGCGCATGGTGGATACCGTGAGCATGAAGGCATCATCAACGCACGTGGTGACTTTGGTGGGTTCCATGATGGTGGCTTGTACATTAAGGACCTGACAATCGTCGGTGAGGCTTCGGCCTTTGAGGCTGCATCGGGACACCCAGTGGCTCTGGTCTCTGCGTACTCCTTCAATGCGTCCCTTGCGTACATCCCCGAATCCTCTCCGGTTACGCCGTGGGGCTTCAAGGAGGTAATCGTGGAGGGCCTGCACTGCCCGTTCAAGCGGACTGGTCGTAGGTTTAACTCTATCATCTCCGCCCCAAGTATCCAGTTCACGGTGTATCACCCAATGCGGGTTAAATTGGAGGACTGTAACTTCAACTCGACGGCGTTCGAGAAGTTCGACCTGAGGGGCTGGAGGGTTACTCCGTACAACCCTTCGAAGGTTGGTATCGCGAACACTCTGGCATTCCGTCCTACGAACTTTGTTGATGTGAAGGACTGCTCGATGGTTGGCCTTGAGTTCACACGGCCACTGAGCGCCTACGATTACTCTAACTTTGACGTAAACCTAGTTAACGTTAAGAACGTAGAGGAGCATTCCCTGTCACCGTTCACTCTGTACACTAACCAGTGTGGTCGTTATAACTTGGTTGGGTGCGGTCTGCAACAGATTGTGGACAAGTCGATGACCACAGGTGAGCGTGCGAACCGTCGTAGTACGTTCTCGGTGACTGGCGGTACTTGGAACTCGCTTTCCGGGAACCCTACGGATATAACCTACGGTAACGGCTATGACATCCCTGTGGTGGCGACTGGCGTTATGTTCGTTGGTCCGTACTCCCAGACTGAAGTGACAGGCGCAAACTTGAACGTTGCGGAGTTCGTTCAGGCATCCGGGTGCAAGTTCCTAAGCTCCGGCCCGACCTACATCCAGCCGTTACTCTGGAGTGGAGCAGCTGGTCCAACTGGAGCGAGTGCCAACTTCAACGTGGCTCGCGGTAACACTCTGGGACTGAACATCTCCGCAGTGAATGGTGAGACGTCTCAGGTTATCGCGGCGACTCTGATGATTCCACAAGGGTTCTCAACTGGTCAGGCTTCAGGAACAACCTACGGGTTCTCCGTGGCAAAGAACATCAACTACCAATTAGGACTTAACGCCCGCAGCCTGAAGGCAAACGTCGGTTTAGTGAGTTGTAGTGATACCATAACCGGGGTGTACCTGAACGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
96ad3bc9f3db57013a8c1197c1cd784e2efc7760e0eb2313694d672d9355157d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6524
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of lytic bacteriophages against carbapenemase-producing K. pneumoniae clinical isolates Paranos,P., Siopi,M., Skliros,D., Zrelovs,N., Svanberga,K., Kazaks,A., Flemetakis,E. and Meletiadis,J. 2024-12-22 — GenBank