Protein

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Genbank accession
WAB57808.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MANINKISMNLIWGVSGDITAPGPEKMNKGWEVEVVPRQWLNYLQNRLDTNVAYLLQKGLPEWDSETEYQANTSYVQRNGVVYKASRTNTNSEPGTTAGNTNWNRAFQEWSPALESLTSLTPTAWRFPFYNASGQATLGGITSYTVGLMGLSSDAAWRAKLKAQTSASQLTWLSNLTPVAGAIPYFNTATSMANLATTPFGRNWIGVADAATGRSQLQLGSAAVMTATAINQASTVVARDSTGTAAIGTVIGSLTGNASTATRLQTGRNINGVLFDGTQDITLPPLTADYAGIVARLHINGANMSGTDKTTQLALRNKSNTDWISLAVIEDNILQFAFRNTSNPIVQIGGEVVLHTGNQFSLGPTLSDARSRLGLDRVSQGSSDTVVFASTLNNGPYLTVQPSSVGGFNGGTQTWMFRFDETGTLTHGTVPVARVSGLANSAQIPAVTTAQSNSLVQRDSSGSFSAVGINAYGSIIGYGSNIFSRSSGTGNAHIGFQKADGSELGLIWGAPSNGSMNFRTLGGSTGMTLTGQDLTVVGRVNAATLNASGNVNATGNVSAGQAILNTAGNITGAAYGTYGSLTNWVDSVYAKKGEIPNDIARAGAAWDAVGQYILAGDQSGGSGGPGTIKAGSQLKPHSTISYTAGAVPAAGQYRCMGAFAGGGNQITLWQRIS
Physico‐chemical
properties
protein length:673 AA
molecular weight: 70099,10290 Da
isoelectric point:8,93417
aromaticity:0,07727
hydropathy:-0,13358

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WAB57808.1
1 673
Domain Start End Length (AA) Confidence
N-terminal 1 280 280 0,6365
Central domain 281 479 200 0,1352
C-terminal 480 673 193 0,8989
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-280
Central
281-479
C-terminal
480-673

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_RP11
[NCBI] 		2951333 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAB57808.1 [NCBI]
Genbank nucleotide accession
ON524867.1 [NCBI]
CDS location
range 44638 -> 46659
strand +
CDS
ATGGCCAATATCAACAAGATCAGTATGAACCTGATTTGGGGCGTCTCTGGTGATATCACCGCCCCAGGTCCGGAAAAGATGAACAAGGGCTGGGAGGTGGAGGTAGTCCCCCGGCAATGGTTGAACTACCTGCAAAACCGGTTGGACACCAACGTGGCCTACCTGCTCCAGAAAGGCCTGCCTGAGTGGGACAGTGAGACCGAGTATCAGGCAAACACCTCCTATGTACAACGCAACGGTGTAGTGTACAAGGCCTCTCGGACAAATACCAACAGTGAGCCTGGCACGACTGCGGGAAACACCAACTGGAACCGGGCTTTCCAAGAGTGGTCTCCAGCTCTGGAGTCCCTGACCTCGCTTACCCCCACTGCGTGGAGATTCCCGTTCTACAACGCTTCGGGACAAGCAACCCTGGGTGGCATCACCTCCTACACTGTAGGGCTCATGGGTCTTAGCTCCGATGCAGCCTGGCGGGCAAAGCTGAAAGCTCAAACGAGTGCTTCCCAGCTCACTTGGCTGTCCAACCTGACACCTGTGGCTGGAGCTATCCCGTATTTCAACACGGCTACCTCCATGGCCAACCTGGCAACGACCCCGTTTGGTCGAAACTGGATCGGCGTAGCAGATGCCGCAACGGGTAGGTCGCAGCTTCAACTCGGCAGCGCTGCTGTCATGACGGCCACTGCTATTAATCAGGCGAGCACAGTTGTTGCCAGGGATTCTACAGGAACTGCCGCCATCGGGACGGTGATTGGTAGCCTGACCGGTAACGCTTCAACTGCGACTCGACTGCAAACCGGGAGAAACATCAACGGTGTCCTTTTTGACGGAACCCAGGATATCACGCTCCCACCTCTGACAGCCGATTACGCAGGTATAGTGGCCCGCCTCCACATCAACGGGGCGAACATGTCAGGGACTGATAAAACAACCCAGTTGGCACTCCGAAACAAGTCTAACACGGATTGGATCAGTCTGGCTGTAATAGAAGATAACATCCTTCAGTTTGCTTTCCGAAACACTTCGAACCCCATCGTACAGATTGGGGGAGAAGTCGTTCTCCACACAGGGAACCAGTTCTCCCTTGGACCAACCCTAAGCGATGCCCGTAGTCGTCTAGGACTTGACCGAGTGTCCCAAGGGTCGTCCGATACCGTGGTATTCGCTAGCACGTTGAATAACGGTCCGTATTTGACCGTCCAACCTTCCTCTGTTGGAGGTTTTAATGGGGGAACGCAGACTTGGATGTTCCGATTCGATGAAACTGGGACACTGACCCACGGGACGGTACCAGTTGCAAGAGTGTCCGGCCTGGCAAACTCTGCTCAGATTCCTGCCGTAACTACTGCCCAGTCTAACTCCCTGGTTCAAAGGGATTCAAGCGGGAGCTTTAGTGCGGTAGGCATCAACGCCTACGGAAGCATTATCGGGTATGGATCGAACATTTTCAGCCGCTCCTCTGGTACAGGGAATGCCCACATCGGTTTCCAGAAGGCAGATGGGAGTGAGTTGGGCCTGATTTGGGGTGCTCCGTCCAACGGGTCCATGAACTTCCGGACTCTGGGTGGATCAACAGGCATGACGCTGACAGGTCAAGATTTGACTGTAGTTGGAAGGGTCAACGCAGCCACGCTGAACGCCTCTGGCAACGTGAATGCAACAGGGAACGTTAGCGCCGGCCAAGCTATTCTCAACACCGCAGGGAACATTACGGGAGCCGCTTACGGCACCTACGGCTCTCTTACCAACTGGGTGGATTCGGTATATGCCAAGAAGGGTGAGATTCCTAACGATATTGCCCGAGCTGGAGCAGCCTGGGACGCCGTAGGGCAGTACATCCTGGCAGGAGACCAGTCAGGCGGGTCGGGAGGCCCTGGCACCATCAAGGCAGGTAGCCAACTGAAACCGCACTCTACCATCAGTTACACCGCAGGGGCAGTTCCGGCAGCCGGGCAGTACCGTTGCATGGGAGCGTTTGCAGGGGGTGGTAACCAGATCACCCTGTGGCAACGCATTTCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e4ad4957c92b67c3d07ec8c7007720838a4fafd5b93a4154338da952f9942e81
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6383
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The phenotypic and genotypic characterization of efficient bacteriophages that are isolated in our laboratory against Pseudomonas Aeruginosa strains isolated from diabetic foot infections Salih,H., Bozdogan,B. and Basbulbul,G. 2011-12-28 — GenBank