Protein

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Genbank accession
ATI16072.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MADYSQLPIENIWSTGGDMVAPTPAQQQGGWGIQSVPRQWWNWKWNLHDTNLAYLLQKGIPEWTSTQEYIANKSFCTRGGFVYKAVRTHTGSDPAQVSANWVRAFADYTTASSALGGLTPREGGIPFFISATGASVFDSTAYGRGMLNVANASAARSYISAQESSVVLSNLSTVTRAANTVPYFNTDTSMATFNITAFGRGLVNAANAENARNFLGLANSAIITADPANRAHTLVYRDAAGNFNAGVITATLSGNATTANKLRTPVTINGVAFDGSQNIVLPGLDTSYAGTVARLHINGANLSSADKTTQLALRNKSDNDWISLAVVDDNILQFVFRSATNPVVQIGNEVILHTGNQFSLGPTLTDARSRLGLDRLTQGSSDTQVFPSTLNNGPYLTVQPTAIGGFNGSTNGWLFRFDANGNMTHGTVPAARITGLSNSAQIPATTTAQANSLVQRDADGGFSAISINAYGTIVGYGSNIFSRASGTGNAHIGFQRANGTELGLIWGAQSNNSMNFRVAGGATAVSITGLDMTVTGRVNATTLNASGNVNATGNVNAGSATLNTAGNITGAAYGAYGSLTNWVDSVYAKKGEIPNDIARAGAAWDAVGQYVLAGDQSNGSGGPGTIRAGSQLRPYSTISYTVGALPSAGSYRCMGAFAGSGNQITLWQRIS
Physico‐chemical
properties
protein length:671 AA
molecular weight: 70014,66260 Da
isoelectric point:8,89614
aromaticity:0,08644
hydropathy:-0,11550

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ATI16072.1
1 671
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,6247
Central domain 313 511 200 0,2696
C-terminal 512 671 159 0,8539
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-511
C-terminal
512-671

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage YS35
[NCBI] 		2036050 Uroviricota > Caudoviricetes > Vandenendeviridae > Pakpunavirus > Pakpunavirus YS35
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATI16072.1 [NCBI]
Genbank nucleotide accession
MF974178 [NCBI]
CDS location
range 47605 -> 49620
strand -
CDS
ATGGCTGATTACAGTCAACTACCTATTGAAAATATTTGGTCCACAGGCGGGGATATGGTAGCCCCGACCCCTGCGCAGCAGCAAGGCGGATGGGGTATTCAGTCGGTTCCTCGCCAATGGTGGAACTGGAAGTGGAACCTTCACGATACTAACCTAGCGTATTTGCTACAGAAGGGCATCCCAGAGTGGACTAGTACACAAGAGTACATTGCTAACAAATCGTTCTGCACTAGAGGTGGATTTGTTTACAAGGCTGTTCGTACGCATACAGGAAGCGACCCTGCACAAGTTAGTGCCAACTGGGTTCGAGCTTTTGCAGATTACACCACAGCTAGTTCAGCACTAGGGGGCCTGACTCCAAGGGAAGGAGGTATTCCTTTCTTCATTAGCGCTACAGGAGCTAGCGTGTTTGACTCTACGGCCTATGGTCGCGGAATGTTGAATGTAGCTAATGCCTCCGCAGCTAGAAGCTACATTTCGGCTCAAGAAAGCTCTGTTGTACTGTCCAACCTGTCCACTGTGACTAGGGCTGCCAACACGGTTCCGTACTTCAATACGGATACCTCCATGGCTACCTTCAACATCACAGCGTTCGGAAGAGGACTTGTCAACGCGGCTAATGCTGAAAACGCAAGAAATTTCCTAGGACTAGCTAACTCTGCTATCATTACGGCAGACCCAGCTAACAGAGCCCACACTCTGGTCTATAGAGACGCTGCTGGTAACTTCAACGCTGGTGTGATTACGGCCACCCTGTCTGGAAACGCAACTACAGCTAACAAGCTTAGAACCCCAGTTACAATCAACGGTGTGGCGTTTGACGGAAGCCAAAACATTGTTCTTCCGGGCCTAGATACAAGTTATGCGGGAACGGTTGCACGTCTTCACATCAACGGAGCGAACCTTTCGAGTGCAGATAAGACTACTCAGCTAGCACTGAGGAACAAATCTGACAACGACTGGATTAGCCTTGCTGTAGTGGATGACAACATTCTCCAGTTTGTATTCAGAAGCGCTACAAACCCAGTTGTACAGATTGGCAACGAAGTTATCCTTCACACAGGAAACCAGTTCTCTCTGGGCCCGACTCTTACAGACGCTAGGTCTCGTCTGGGTCTCGACAGACTCACTCAAGGTAGCTCTGATACTCAAGTCTTCCCCAGCACCTTGAACAATGGCCCCTACTTGACCGTACAACCTACGGCTATCGGAGGATTCAACGGTAGCACTAACGGATGGCTGTTCCGATTCGACGCTAATGGTAACATGACTCATGGTACAGTTCCTGCCGCTAGAATCACTGGTCTGTCCAACTCGGCTCAGATTCCAGCCACAACTACGGCGCAGGCTAACTCTCTTGTTCAGAGAGACGCAGACGGAGGATTCAGCGCTATTTCGATTAATGCGTATGGCACTATCGTCGGGTACGGCTCTAACATCTTCAGTAGAGCATCGGGCACTGGCAATGCCCACATTGGGTTCCAGAGAGCGAACGGAACAGAACTCGGTCTTATCTGGGGAGCCCAATCTAACAACTCGATGAACTTCCGAGTTGCTGGCGGAGCCACCGCAGTGTCGATTACCGGTCTGGACATGACTGTTACTGGAAGAGTCAATGCTACCACACTAAACGCCTCTGGAAACGTGAATGCGACAGGCAACGTTAACGCCGGGAGCGCTACGCTCAATACAGCAGGGAATATCACAGGAGCCGCTTACGGAGCCTATGGTTCTCTGACCAACTGGGTTGATTCGGTATATGCGAAGAAGGGAGAGATTCCTAATGATATCGCTAGAGCTGGGGCCGCTTGGGACGCAGTTGGGCAATACGTCCTAGCCGGCGATCAGTCTAATGGCTCCGGCGGCCCGGGAACGATCAGAGCTGGCAGCCAGTTGAGACCGTACTCGACGATTAGCTACACAGTAGGCGCCCTTCCGTCCGCAGGCTCTTACAGATGTATGGGAGCGTTTGCAGGCAGTGGTAACCAGATTACCCTGTGGCAGAGAATTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a8ecdae28993769e259c6ce6df8c7700b1d9f2a932dabfa3c75a391849785b3f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6404
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of lytic bacteriophage YS35 Yu,S., Huang,H., Hao,Y., Shi,H. and Sun,Y. 2005-02 — GenBank