Protein

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Genbank accession
AIM51760.1 [GenBank]
Protein name
right handed beta helix region family protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANKPTQPVFPLGLETSEQSTLAGFTNTGTIEHGPDAVMTLPESNTVAGLPSAVRFNSEADEFEGYYENGGWLPLGGGGIRWEVLPHASTAVLDKGRGYLVDNSTDVSTVVFPTPTRVGDSITVCDLYGKFSIYPLTIDPNGHPMYGSTEPMTLSTDSVSATFTWSGDARGWIVTAGVGLGLGRVYSRTIFTETVSADTAQVTLTTQPSIVDVYVDGKRLLESKYSLNGFNVDFSPSIPSGSELQVIQYVPIQLGVGGGGSGGGTVITWIYNSGSAVGGETEIELDVDAEDVSEIYISGSRQQKGLGFNYDSVTKIITLAAVLEAGDEVVVVVNGDPTLYNQIDRTPNEVARSANVPVSQVILTSDTITKLDGKTVIYDVNAQKMWSLPSGIPTGASIVSVIGSNLTYAPGNVVVPLLPAPGSKDALEAYKSELLAGNTGLVAASAVVVTPQGTLAEMQYYVTPEQFSHLVTAGEYVDENTDFTLAVQGAVDYAASHPGVIVRGTEKVYGVSRILVAVGVKVIDGLKLKCIVANTDTLLYSFVDTGHTDLQIRNCILNGNNNTRKGIIVSGVIRATIEKNYVYGLDGTGEAYGIRIGTTSTTSMNINNKISDNIIEMPTDPFGGTGNYAICGIGMIGQITSLYGGLDTNAGVPLFPSTITLRDTIIEGNFISGGTHGVQGLGLFRTLITKNHIMGNTHRNINLSPNCQRVNIVGNLLIDGGSSGVNVAWGCRWINISGNHIQTSTASVSPSDDAAIQLYKGVDQCTVSGNTILGDWKYSVYMGAGVTNVSVNANGLFAGSLASIAVESDWVLTADYPLAIYSSSRNPNTTPIAGDTGNINIGGNAYGAGSCAIYLAATNSKAMYNVNIHDEVINSVTSRPHVVYAYDAGTLMTDGSLTNIAARGATASKYYLSRGRGAFSVIRDITALDDPKGEVTVLGGTPSAVFGPNLYIASGTITDFTGAQAGDIINLRMGDGVVLIHNSTVMRLKGGVNATASGGLAIMTFQRRAGIWFEMSRNF
Physico‐chemical
properties
protein length:1019 AA
molecular weight: 107088,10540 Da
isoelectric point:4,81446
aromaticity:0,07556
hydropathy:0,06477

Domains

Domains [InterPro]
DC_1064
ATT
4–217
DC_1064 G3DSA:3.30.2020.50 DC_1445 IPR039448 DC_1714
G3DSA:3.30.2020.50
ATT
339–421
G3DSA:3.30.2020.50 IPR012334 IPR006626
IPR006626
Unmapped
547–571
IPR006626 IPR006626 IPR011050
IPR006626
Unmapped
683–705
IPR006626 IPR006626 IPR006626
AIM51760.1
1 1019
Architecture
ATT
ATT
STR
RBD
ATT 4-217 | ATT 335-421 | STR 422-888 | RBD 889-1019
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AIM51760.1
1 1019
Domain Start End Length (AA) Confidence
N-terminal 1 477 477 0,9960
Central domain 478 930 454 0,9924
C-terminal 931 1019 88 0,9805
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-477
Central
478-930
C-terminal
931-1019

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage phiDP23.1
[NCBI] 		1542133 Uroviricota > Caudoviricetes > Pantevenvirales > Aglimvirinae >
Host Dickeya sp.
[NCBI] 		1914291 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AIM51760.1 [NCBI]
Genbank nucleotide accession
KM209294 [NCBI]
CDS location
range 7884 -> 10943
strand -
CDS
ATGGCTAACAAACCAACACAGCCTGTTTTCCCTCTCGGACTTGAAACTTCGGAGCAATCTACGCTGGCTGGATTTACCAACACAGGAACTATCGAACACGGACCAGACGCGGTCATGACTTTGCCAGAGAGCAATACTGTTGCTGGCCTCCCTTCTGCCGTCCGATTCAATTCCGAAGCGGATGAATTTGAGGGGTATTACGAGAACGGTGGGTGGTTGCCTCTGGGTGGCGGCGGTATCCGCTGGGAAGTCCTTCCACATGCCTCTACGGCAGTCTTGGACAAAGGCCGAGGCTATCTGGTTGATAACAGCACAGACGTCTCTACAGTGGTGTTCCCAACGCCTACGCGTGTTGGTGATTCTATTACTGTCTGCGACTTGTATGGCAAATTCTCCATCTACCCTCTGACCATCGATCCAAACGGTCATCCAATGTACGGCTCCACAGAGCCTATGACATTGTCCACAGACAGCGTTTCGGCGACGTTTACTTGGTCAGGTGATGCTCGCGGCTGGATTGTTACTGCTGGTGTTGGCCTTGGTCTGGGGCGTGTGTATAGCCGCACAATCTTCACAGAAACTGTTTCGGCAGACACTGCACAGGTGACACTGACAACACAGCCGTCGATTGTGGACGTCTATGTGGACGGCAAACGCCTGCTGGAATCAAAGTACTCCCTCAATGGTTTCAATGTCGACTTCAGTCCATCAATCCCATCAGGCTCTGAGCTGCAGGTCATTCAGTATGTGCCTATTCAATTGGGCGTGGGTGGCGGCGGTTCTGGCGGCGGCACAGTCATCACATGGATTTACAACAGCGGTTCTGCAGTTGGTGGTGAGACTGAAATTGAATTAGACGTGGATGCTGAAGACGTGTCCGAGATCTACATCAGTGGATCTCGCCAGCAGAAAGGTCTGGGCTTCAATTATGACTCTGTTACGAAGATCATCACGCTGGCCGCCGTACTCGAAGCTGGTGATGAAGTCGTCGTCGTCGTCAATGGCGATCCGACTCTGTACAACCAGATTGACCGCACTCCGAATGAAGTGGCGCGTTCCGCCAACGTTCCTGTGTCTCAGGTGATTCTGACATCTGATACCATCACCAAATTGGATGGTAAGACAGTCATATACGACGTGAACGCACAAAAGATGTGGAGCCTGCCTTCGGGTATTCCGACAGGGGCTTCTATTGTCTCTGTGATCGGAAGCAACCTGACCTACGCTCCTGGCAACGTCGTGGTGCCACTGTTACCAGCCCCTGGCAGCAAAGATGCTCTCGAAGCGTATAAAAGCGAGTTGCTGGCCGGAAATACAGGTCTGGTGGCTGCGAGCGCTGTCGTTGTGACGCCTCAGGGCACTTTGGCCGAAATGCAATACTATGTCACGCCAGAGCAATTCTCTCATCTGGTTACGGCTGGCGAGTACGTCGATGAAAACACAGATTTCACTCTGGCTGTTCAGGGTGCTGTTGATTATGCTGCGAGTCATCCAGGAGTTATCGTCCGTGGCACAGAAAAGGTCTATGGTGTAAGCCGTATTCTGGTGGCGGTTGGTGTCAAAGTTATCGATGGCCTGAAGCTGAAGTGTATCGTTGCCAACACAGACACACTGCTCTACTCCTTCGTCGATACTGGGCACACCGATTTACAAATCAGAAACTGTATCCTTAATGGTAACAACAACACCAGAAAGGGCATCATCGTTTCCGGTGTCATCCGTGCGACTATCGAGAAGAACTACGTTTATGGTTTGGACGGTACTGGCGAGGCTTACGGTATCCGTATCGGCACGACTAGCACGACTTCCATGAACATCAACAACAAAATCAGCGACAACATTATTGAGATGCCCACTGACCCATTTGGTGGCACAGGCAACTATGCGATTTGCGGTATCGGTATGATCGGGCAAATCACATCCCTGTATGGTGGCCTAGACACCAATGCTGGGGTTCCGTTGTTCCCGTCTACGATCACGCTGCGAGACACTATTATTGAAGGAAACTTCATTTCTGGTGGCACCCATGGTGTCCAGGGTCTGGGTCTGTTCCGAACACTGATCACGAAGAACCACATCATGGGGAACACTCACCGAAATATCAACCTCAGTCCGAACTGTCAGCGAGTAAATATCGTCGGCAACCTTCTGATTGACGGCGGTAGTTCAGGTGTCAACGTTGCTTGGGGTTGTCGTTGGATCAACATCTCTGGTAACCATATCCAGACTTCGACTGCTTCTGTATCCCCATCAGATGATGCAGCAATCCAGCTCTACAAGGGCGTTGACCAATGTACCGTCAGCGGGAACACAATCCTCGGCGACTGGAAATACAGCGTTTACATGGGTGCTGGCGTCACCAACGTGTCTGTCAATGCTAACGGCTTGTTTGCTGGTTCCCTGGCGAGCATCGCCGTGGAATCGGATTGGGTGCTGACTGCAGATTATCCTCTGGCGATCTACAGCAGTTCTCGTAACCCGAACACCACCCCTATCGCTGGTGACACAGGCAACATCAATATTGGCGGTAACGCATATGGGGCGGGATCTTGCGCTATCTACCTGGCCGCCACCAATAGCAAAGCGATGTACAACGTCAACATCCATGACGAAGTCATTAACTCGGTCACATCTCGTCCACATGTTGTTTATGCATACGACGCCGGAACCCTGATGACTGATGGTTCCCTGACCAACATTGCTGCTCGTGGGGCTACTGCCAGCAAGTATTATCTCAGCCGTGGGCGCGGCGCTTTCAGCGTGATCAGGGACATTACCGCTCTTGATGATCCGAAAGGTGAAGTGACGGTATTGGGTGGCACTCCATCTGCAGTGTTTGGCCCAAACCTATATATTGCTTCAGGAACGATCACTGACTTCACTGGTGCACAAGCAGGTGATATCATCAACCTACGAATGGGTGATGGGGTTGTCCTCATCCACAACAGCACTGTGATGCGCCTCAAAGGTGGTGTGAACGCCACGGCTTCCGGTGGCCTGGCTATTATGACATTTCAGCGCCGAGCTGGCATATGGTTCGAGATGTCTCGCAACTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a29fa6655612c356cb018fdfecd9dd0d05ca3f99f29c4bde42fe9c68ff54caab
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7348
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50