Protein
View in Explore- Genbank accession
- CAH1087919.1 [GenBank]
- Protein name
- putative transporter
- RBP type
-
TSP
- Protein sequence
-
MQKHDAFAALRYRDFSIVTINQFCLTLAILIQEIIVAYSLYQITKDPLTLGLIGLAEAIPFIALSLWGGYFADKFNKQVIMKICLFFSVPLPLVLWLLFHLHGLGHISVNFLSWGIYAVIFGLGTIRGFYNPSATSLKPFLIPRELYANGATWTTIGWQSGVIIGPMLGGFMLAYLGRETSLFSVAGLLSICFILINLLHKRSFPKIETANVIESLGDGFRFIWKTKIVLWAISLDLASVLFGGVIALLPIFAEDILKVGPEGLGYLRAAPSIGALITMIALTRFPPTQHAWRNMLLAVAGFGVFTILFAFSNNMWLSLFALAMTGACDSISVVVRQTILQIFPPENMRGRVAAVNGMFVSSSNELGAFESGLAAKYLGTIAATIFGGCMTLAVVTFCWLKTNDLFKVDITKSSED
- Physico‐chemical
properties -
protein length: 416 AA molecular weight: 45610,54430 Da isoelectric point: 8,83167 aromaticity: 0,12740 hydropathy: 0,74712
Domains
Domains [InterPro]
PTHR23513
Unmapped
4–400
Unmapped
4–400
IPR010290
STR
6–400
STR
6–400
IPR036259
STR
12–401
STR
12–401
cd06173
STR
22–401
STR
22–401
cd06173
STR
22–395
STR
22–395
1
416
Architecture
STR 6-401 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
416
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 74 | 74 | 0,9455 |
| Central domain | 75 | 273 | 200 | 0,1155 |
| C-terminal | 274 | 416 | 142 | 0,0702 |
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-74
1-74
Central
75-273
75-273
C-terminal
274-416
274-416
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Acinetobacter phage MD-2021a [NCBI] |
2899278 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAH1087919.1
[NCBI]
Genbank nucleotide accession
CAKLQH020000014
[NCBI]
CDS location
range 29462 -> 30712
strand +
strand +
CDS
ATGCAGAAACATGATGCATTCGCTGCCCTGCGCTATAGAGATTTCTCAATTGTCACCATTAATCAATTTTGCTTAACATTAGCAATTTTGATTCAAGAAATTATTGTTGCCTATTCACTTTATCAAATTACCAAAGACCCTCTAACTTTAGGTTTAATTGGACTAGCAGAAGCCATTCCATTTATTGCCCTATCGCTTTGGGGTGGTTATTTTGCTGATAAATTTAATAAACAGGTCATCATGAAAATCTGTTTATTTTTCTCAGTACCTCTTCCTTTAGTTTTATGGTTACTGTTCCATCTGCATGGGTTGGGTCATATCAGTGTAAATTTCCTTTCTTGGGGTATTTATGCAGTTATTTTTGGTTTGGGCACCATACGTGGTTTTTATAACCCTTCTGCTACGTCCCTAAAACCATTTTTAATTCCACGTGAGCTTTATGCAAATGGTGCAACATGGACAACCATTGGTTGGCAGAGTGGTGTAATTATTGGACCTATGCTCGGTGGGTTCATGCTCGCTTATTTAGGCAGAGAAACCAGTCTTTTTAGTGTTGCCGGTCTACTTAGTATCTGCTTTATTCTCATTAATTTATTACATAAACGTAGCTTTCCTAAAATTGAAACTGCCAATGTTATAGAAAGCTTAGGCGATGGCTTTCGCTTTATTTGGAAAACCAAAATAGTTCTTTGGGCGATTTCTTTAGACCTTGCCTCTGTTTTATTTGGTGGTGTAATCGCTCTACTCCCTATTTTTGCCGAAGATATTTTAAAAGTCGGTCCTGAAGGCTTGGGTTACTTGCGTGCAGCTCCTTCTATTGGTGCGCTCATTACTATGATTGCTTTAACTCGTTTTCCGCCAACTCAGCACGCATGGCGTAATATGCTACTTGCAGTTGCAGGGTTTGGTGTATTTACAATCCTTTTCGCGTTCTCGAACAACATGTGGTTATCACTATTTGCGTTGGCGATGACGGGTGCTTGCGACAGTATTTCGGTGGTAGTTAGACAAACCATTTTGCAAATATTCCCACCAGAAAATATGCGTGGTCGCGTAGCGGCTGTAAATGGAATGTTTGTCTCATCAAGTAATGAGCTGGGTGCATTTGAGTCAGGCTTAGCTGCCAAATATTTAGGAACTATTGCAGCGACTATTTTTGGTGGGTGTATGACTCTTGCAGTAGTAACCTTCTGTTGGCTAAAAACCAATGATCTTTTTAAAGTCGATATTACTAAAAGCTCAGAAGATTAG
Genome Context
Genome Context
Tertiary structure
PDB ID
cd278298e42561aa1109bc59f13ec12ef3cf0ca536a0f6b436a89b6863b3ea5b
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50