Protein

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Genbank accession
UGL60234.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNPQFAQPKGSTSKESNKDSIARKFGCKKSEVVYAKSGQSLSGYKVIYDKVSQRAYALPSNIGTVTVTSLVDGILTHSGGTVDLGALAVLREEYVTLVENFTSGFTIRVKNEVVSDGVNLYRWAGSLPKTVNAGETVDSAGGVNNDTWVVLGKPDINICSDISVLRTTEPSYIGQHITVLGYYSDSPGLGGGTFMAFASSEADDGVNIFVTAGGKRWKRTGSYIDIPVENGGMMTSRTAEQNSDALERLHACLPQTGGKLRFSGFYDIKYGAIRPPRVMWEGVGRDSCGLRKTGNDIKTVPDRIWQGAPHSFSLDFIAAIDMDSSVAGELTGNFSRSGGITGMSLIGAATAKNAYGIYSSISYMVRLEDLYIEHVMTGYRTSDSWLQAFDSLLIKDVQDGISVDTGGTTFNLNNVYVRNVSRWAYKFTNITYSTLKGCAADYVTGSAYVFLGCTSVVMDGCGAEEVHGSFFECNQSRIAINGFRGVNLVDTGVVACIFTQCGVTITASYLPEFSGSHTSKYWQVGDTTINLDNTVAPDASRVLWGAATSWLNFSHYNGNYTIWGTVTWTATGYLINGIAHVYGGNPPDASVTQFGTGARWELAIPVAGQPYKWIHMGSGVWKVAGSVAA
Physico‐chemical
properties
protein length:629 AA
molecular weight: 67621,15370 Da
isoelectric point:6,09288
aromaticity:0,10652
hydropathy:-0,07965

Domains

Domains [InterPro]
G3DSA:3.30.2020.50
ATT
1–93
G3DSA:3.30.2020.50 G3DSA:2.10.10.80
DC_0071
STR
1–627
DC_0071
IPR040775
RBD
90–152
IPR040775
UGL60234.1
1 629
Architecture
ATT
STR
ATT 1-150 | STR 151-627 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UGL60234.1
1 629
Domain Start End Length (AA) Confidence
N-terminal 1 237 237 0,9926
Central domain 238 548 312 0,9824
C-terminal 549 629 80 0,9009
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-237
Central
238-548
C-terminal
549-629

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenAc-pSC20
[NCBI] 		2894724 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UGL60234.1 [NCBI]
Genbank nucleotide accession
OK539832.1 [NCBI]
CDS location
range 96463 -> 98352
strand +
CDS
ATGAATCCGCAATTTGCTCAACCAAAAGGTTCTACTTCAAAAGAATCGAACAAAGACAGTATTGCTCGTAAATTTGGGTGTAAAAAGTCGGAAGTCGTTTATGCGAAATCAGGACAGTCCTTGTCTGGTTATAAAGTGATCTACGATAAGGTGTCTCAACGTGCCTACGCTCTCCCTTCTAACATTGGTACTGTAACGGTCACTAGTTTAGTCGACGGCATTCTCACGCACTCTGGAGGCACCGTAGATTTGGGTGCATTGGCTGTGTTAAGGGAAGAGTATGTTACTCTTGTTGAAAATTTTACTTCTGGATTTACGATTCGTGTCAAAAACGAAGTTGTGAGTGATGGGGTAAATTTGTATCGGTGGGCTGGTTCTTTACCAAAAACTGTTAATGCAGGTGAAACCGTCGATAGTGCTGGTGGTGTAAATAATGATACTTGGGTAGTTTTGGGTAAACCAGATATCAATATTTGCTCAGATATTTCTGTTCTACGAACAACTGAACCTTCATATATTGGTCAACATATAACAGTCCTTGGGTATTATTCCGATTCTCCGGGTCTTGGTGGAGGAACATTTATGGCGTTTGCCAGTTCCGAAGCTGACGATGGAGTTAATATCTTTGTAACGGCAGGAGGAAAACGCTGGAAGCGAACGGGAAGCTACATAGATATTCCGGTTGAGAATGGTGGCATGATGACCTCCAGAACGGCCGAACAAAACAGCGATGCTCTTGAAAGGCTTCATGCTTGTCTTCCTCAAACTGGGGGTAAGTTACGCTTCTCAGGTTTCTACGATATTAAGTACGGAGCAATTCGCCCGCCACGAGTTATGTGGGAGGGGGTGGGTAGAGATTCTTGCGGCCTTCGCAAAACAGGTAACGACATTAAAACCGTTCCAGATCGCATATGGCAAGGCGCACCGCATAGTTTCTCCCTTGACTTTATTGCTGCCATTGATATGGATAGTAGCGTTGCAGGGGAACTGACTGGTAACTTTAGTCGTTCCGGAGGAATAACTGGGATGAGCCTGATTGGCGCTGCTACTGCAAAAAATGCCTATGGTATTTATAGCTCTATCAGTTATATGGTTCGATTGGAGGATTTGTATATTGAGCATGTTATGACTGGCTACAGAACTAGTGACAGTTGGCTTCAGGCGTTTGATTCACTTCTCATCAAAGATGTTCAAGATGGCATCTCTGTAGATACTGGTGGTACAACTTTTAACTTAAATAATGTTTATGTCAGGAATGTATCCCGTTGGGCATATAAGTTTACTAACATTACTTATTCCACTCTTAAAGGTTGTGCAGCGGATTATGTAACTGGTTCCGCTTATGTATTCTTAGGTTGCACTAGTGTAGTGATGGACGGATGTGGAGCAGAAGAGGTTCACGGTAGCTTCTTTGAGTGTAATCAATCTCGTATAGCTATTAATGGATTCCGTGGTGTTAACCTTGTGGATACTGGTGTGGTTGCATGCATCTTTACACAGTGTGGCGTTACAATCACGGCAAGTTACTTACCAGAGTTCTCTGGCTCGCATACTAGCAAATACTGGCAGGTTGGTGACACTACTATTAATCTCGATAACACAGTGGCTCCTGACGCATCTAGAGTTCTTTGGGGGGCAGCAACATCATGGTTAAACTTCTCACACTATAATGGTAATTATACCATCTGGGGGACAGTTACCTGGACTGCAACCGGCTACCTCATTAATGGTATTGCACATGTCTATGGGGGAAACCCTCCTGATGCTTCTGTTACTCAGTTCGGTACGGGTGCAAGATGGGAGCTAGCTATTCCTGTTGCTGGGCAACCATATAAATGGATTCACATGGGTTCTGGTGTGTGGAAAGTTGCTGGATCTGTAGCAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
32fa894ec0e83cb708b9c5243b7ec90939862a90bb5c01f62b24c377795de136
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7961
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella virus vB_SenAc-pSC20 Park,S.Y., Kwon,H.M. and Kim,J.H. 2012-09-15 — GenBank