Protein

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Genbank accession
USN14229.1 [GenBank]
Protein name
putative tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MDPFSFAVMAVAQIGIGFLFPAEGPRLKDLKISASTYGAAIPNAYGIVRVAGNMIWTDKIKEIKKKKTVALKRYKYYLYTGTFAMAICRGPITNVRKIWANHKLIYDATGTGKLAIKKTFKFKVYDGGENQMPDPTIEKIVGEGNTPAYRGLAYILFQDMPLEDFGNSIPQISVEVFAQGDGEGEIIGRATPVTFSRITSYQTTEVAYNGDMDLIAVGLTNGGIAALRPSSSREEGRGATPGLAALLGVSPTTGALVTQGDGGFSNSEPFILYDPVTFETIGRFGTSSNSTSEFPVGNRAGAFSVDREGREWCMYTSVLGYQRALCTSAFGLGGLADLGSQSRGVYGDSFYVGVSGEPSATFYIFEGGDRSGSAVTNLHLYRVSQAGGWAKSEVVAIENEGAISNFQTLGCHYDPADKGVLLVWRNAQRHYIGKYLPEQSRWAWRKTALNAGVAGVQSSVLTTGEFWWVSGSRLYKMNAATGDYIVEIHDPYAALDPDWMSQAAVNESTSNLLYRGQPLYGPTGNTVTFPSSVSQYADPGNGQIVTYGSQGIQVIRKGLTVKPESTTLAGLVATLLNRAGLTPAQYDLTALQSQPVRGYGWASLSDLRSVLAQLRMLYLFDLVERNGVMVGVMRGAGSNESQTGKPVRRITSKLLGTTGDGEGVDFWKESRLQDADLPRRVHLSYMNWDQDFETSTAQTRRISNPIPAMFSYQQVSMEMGVVMTAKEAKDQVNRMLWAQWAERTQHETSLPWAYIDLDPADIVDVRFPDGRRYRERLHQTEFGANWTYALETFSQDSMAYESDAVADGGSGVIDPLPFIPPRAAKAIVLNTPLMRDADDTGGAYSLHYLGVAHGGQTPFDGAGMWRSEDGVNYDLVYLTDQDTEWAQVSGVVPPPRHGAHGLDWETRITLWPTIDWFELESITDDELWSGANMCALGAELIQFRDCVENADGSWTIWNLLRGRRGTEYACASHALGEMFVVLSPSTLEPGAELLDQRAKTRWHRAVGDGVKPELSPSTITRYEPRDLMPYAPKDIRRTVLGTTVTLTWKRRTRMGGNMQDLTGSVPLNEGRERYEVFILKAGFTGDLSRSDEVPAEAQVLYRVETDSPELTVDVSGFTAPFDVNLDSIHVLIYQLSTAVGRGFPGVRSIEPWQDF
Physico‐chemical
properties
protein length:1155 AA
molecular weight: 126826,26370 Da
isoelectric point:5,29128
aromaticity:0,10216
hydropathy:-0,25948

Domains

Domains [InterPro]
DC_1879
ATT
1–218
DC_1879 IPR032876 IPR056490 DC_0263
DC_2254
STR
640–883
DC_2254
USN14229.1
1 1155
Architecture
ATT
ATT
STR
RBD
ATT 1-218 | ATT 607-780 | STR 781-883 | RBD 901-1152 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
USN14229.1
1 1155
Domain Start End Length (AA) Confidence
N-terminal 1 208 208 0,8387
Central domain 209 407 200 0,5553
C-terminal 408 1155 747 0,1287
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-208
Central
209-407
C-terminal
408-1155

Taxonomy

  Name Taxonomy ID Lineage
Phage Brevundimonas phage vB_BpoS-Kabachok
[NCBI] 		2948600 Uroviricota > Caudoviricetes > Jeanschmidtviridae > Marchewkavirus kabachok >
Host Brevundimonas pondensis
[NCBI] 		2774189 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
USN14229.1 [NCBI]
Genbank nucleotide accession
ON529852 [NCBI]
CDS location
range 238475 -> 241942
strand -
CDS
ATGGACCCGTTTTCGTTCGCCGTCATGGCGGTGGCCCAGATCGGGATCGGTTTCCTGTTCCCGGCCGAAGGCCCCCGCCTGAAGGACCTGAAAATCTCCGCCTCCACCTATGGCGCGGCGATCCCGAATGCTTACGGGATCGTGCGGGTGGCCGGCAACATGATTTGGACGGACAAGATCAAGGAGATCAAGAAGAAGAAGACCGTCGCGCTCAAGCGTTACAAATATTACCTCTACACGGGTACGTTCGCGATGGCGATCTGCCGAGGACCGATCACCAACGTCCGGAAAATCTGGGCCAACCACAAGCTGATCTACGACGCCACGGGAACCGGAAAACTCGCCATCAAGAAGACCTTCAAGTTCAAGGTCTACGATGGCGGCGAGAACCAGATGCCGGACCCGACCATCGAGAAGATCGTGGGCGAGGGCAATACGCCGGCCTATCGCGGCCTGGCCTATATCCTGTTCCAGGACATGCCTCTGGAGGACTTCGGCAACTCGATCCCTCAGATCAGCGTCGAGGTGTTCGCCCAGGGCGACGGCGAGGGCGAGATCATCGGCCGCGCCACGCCGGTCACCTTCTCGCGCATCACCAGCTATCAGACGACCGAAGTCGCCTACAACGGCGACATGGACCTGATCGCCGTCGGCCTGACGAACGGCGGCATCGCGGCCTTGCGTCCGTCCAGCAGCCGGGAAGAGGGGCGTGGCGCCACGCCGGGCCTCGCCGCCCTGCTGGGGGTATCGCCCACCACTGGCGCTCTGGTCACCCAGGGCGACGGCGGCTTCTCCAATTCCGAGCCCTTCATCCTCTATGATCCGGTGACGTTCGAAACCATCGGGCGCTTCGGGACCTCCTCCAACTCCACCTCCGAGTTCCCCGTCGGCAACCGGGCTGGCGCTTTCAGCGTGGATCGGGAAGGCCGTGAGTGGTGCATGTATACCAGCGTGCTGGGCTACCAGCGCGCCCTGTGCACCTCGGCGTTTGGTTTGGGAGGCCTGGCTGATCTCGGGTCTCAAAGTCGCGGCGTCTACGGCGACAGCTTCTATGTCGGCGTGTCGGGCGAACCCAGCGCGACCTTCTACATCTTCGAAGGCGGAGACCGCTCGGGAAGCGCGGTGACGAACCTGCATCTGTATCGCGTGTCCCAGGCCGGAGGCTGGGCGAAGTCCGAGGTCGTCGCCATCGAGAATGAAGGCGCGATCAGCAACTTCCAGACGCTCGGCTGCCACTATGACCCGGCCGATAAGGGCGTTCTGCTGGTTTGGCGCAACGCCCAACGGCACTATATCGGCAAATACCTCCCGGAACAGTCCCGCTGGGCCTGGCGCAAGACGGCGCTCAACGCCGGCGTGGCCGGCGTGCAATCCTCCGTGCTGACCACCGGCGAGTTCTGGTGGGTCTCCGGCTCGCGCCTCTACAAGATGAACGCGGCGACCGGCGACTACATCGTCGAGATTCACGATCCTTACGCGGCGCTCGACCCGGACTGGATGTCCCAGGCCGCCGTGAACGAGTCGACGTCCAATCTGCTCTATCGGGGGCAGCCCCTCTATGGCCCGACCGGGAACACCGTCACCTTCCCTTCCAGCGTCTCGCAGTACGCTGATCCGGGCAATGGGCAGATCGTGACCTATGGCTCTCAGGGCATCCAGGTCATTCGCAAGGGCCTCACCGTGAAGCCGGAGTCCACCACGCTGGCGGGGCTTGTGGCGACCCTGTTGAACCGCGCAGGACTGACCCCGGCGCAGTACGATCTGACGGCCTTGCAATCGCAGCCCGTGCGAGGCTACGGCTGGGCTTCCCTGTCGGACCTGCGATCCGTCCTGGCCCAGTTGCGCATGCTCTATCTGTTCGATCTGGTCGAGCGGAACGGCGTCATGGTCGGCGTCATGCGCGGCGCCGGATCGAACGAATCCCAGACCGGGAAACCCGTGCGTCGGATCACGTCCAAGCTTCTGGGGACGACCGGCGACGGCGAGGGCGTCGATTTCTGGAAGGAAAGCCGTCTCCAGGACGCCGATCTGCCGCGCCGCGTCCACCTGTCCTACATGAACTGGGATCAGGACTTCGAGACCTCGACCGCCCAGACGCGCCGCATCTCCAACCCGATCCCGGCGATGTTCTCCTATCAGCAGGTCTCGATGGAGATGGGCGTCGTCATGACGGCCAAAGAGGCCAAGGATCAGGTCAATCGCATGCTCTGGGCGCAATGGGCTGAGCGCACCCAGCATGAGACCAGCCTGCCCTGGGCCTACATCGATCTCGATCCGGCGGACATCGTCGACGTTCGCTTCCCTGACGGCCGCCGCTACCGTGAGCGCCTGCATCAGACCGAGTTCGGCGCCAACTGGACCTACGCCCTGGAGACCTTCAGCCAGGACTCCATGGCCTATGAGAGCGACGCCGTGGCCGACGGCGGCTCCGGCGTCATCGATCCTCTACCCTTCATCCCGCCGCGCGCCGCCAAGGCCATCGTGCTGAACACGCCGCTGATGCGCGACGCGGACGACACGGGCGGCGCCTACTCCTTGCACTACCTCGGTGTGGCGCATGGCGGACAAACCCCGTTCGACGGCGCCGGCATGTGGCGTTCTGAAGACGGCGTCAACTATGACCTGGTCTACCTGACGGATCAGGACACGGAGTGGGCGCAGGTGTCCGGCGTCGTCCCGCCGCCGCGTCACGGCGCGCACGGCCTTGACTGGGAGACGCGGATCACCCTGTGGCCGACGATCGACTGGTTCGAACTGGAATCGATCACGGATGACGAACTGTGGTCCGGGGCCAACATGTGCGCGCTCGGGGCTGAACTGATCCAGTTCCGCGATTGCGTCGAGAACGCGGACGGCTCGTGGACCATCTGGAACCTCCTGCGCGGACGCCGGGGCACCGAATACGCCTGCGCGTCGCATGCCCTGGGCGAGATGTTCGTCGTCCTCTCCCCCAGCACGCTCGAACCGGGAGCGGAACTGCTCGACCAACGGGCCAAGACCCGCTGGCACCGGGCCGTCGGCGACGGCGTCAAGCCTGAGTTGTCGCCCTCCACCATCACGCGCTACGAGCCGCGCGACCTGATGCCCTATGCGCCCAAGGACATTCGACGGACTGTGCTTGGCACGACGGTGACCCTGACGTGGAAACGTCGGACCCGCATGGGCGGAAACATGCAAGACCTGACGGGATCGGTGCCGCTCAATGAAGGGCGTGAGCGCTATGAGGTCTTCATCCTCAAGGCAGGGTTCACGGGTGATCTGTCGCGCAGCGACGAAGTCCCGGCCGAGGCCCAGGTCCTCTACCGGGTCGAAACGGACAGTCCCGAACTGACCGTCGATGTGTCAGGATTTACGGCGCCCTTTGACGTAAATCTTGACTCGATCCACGTTCTGATCTATCAACTGTCTACTGCGGTTGGCCGTGGATTCCCCGGTGTTCGTTCGATCGAGCCCTGGCAGGACTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2d5e7ebd57581f2050dad8b0126b8876dce4398ab1c6743da4dbe4c093c135ce
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2828
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50