Protein

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Genbank accession
UTQ79899.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MADTVIHYRFLVRGGTAADLAVVNEIPMARELVVEVDTKRMKLGDGIKRYNDLSYISGAAIITLSAPPTAATGNDGEYAIWPNNGNPILYGPKVNGAWPAGVSLKGPQGDRGPTGSTGPQGQQGLSAYQVAVANGFAGTQAQWLASLKGEKGDRGEQGPAGISADRRVQVIANSGTGTVACDWDAYDEIRVTVTTDTTFTFSGARNGQGCMLKIRQDSTGGHTIALPVLVMRFNLNIPSYNPSLGANVSDLLGFRYDGTDSRYDLIALTRGIPGT
Physico‐chemical
properties
protein length:275 AA
molecular weight: 28966,16770 Da
isoelectric point:6,12971
aromaticity:0,07273
hydropathy:-0,21055

Domains

Domains [InterPro]
DC_1725
STR
4–269
DC_1725
SSF69349
STR
8–148
SSF69349
IPR041352
ATT
13–47
IPR041352
UTQ79899.1
1 275
Architecture
ATT
STR
ATT 4-47 | STR 48-269 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage HXX_Dennis
[NCBI] 		2961685 Viruses >
Host Xanthomonas campestris
[NCBI] 		339 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UTQ79899.1 [NCBI]
Genbank nucleotide accession
ON711490.1 [NCBI]
CDS location
range 27597 -> 28424
strand +
CDS
ATGGCTGACACCGTCATCCACTACCGATTCCTGGTGCGCGGCGGTACCGCCGCTGACCTGGCTGTGGTGAACGAAATCCCGATGGCCCGTGAGCTGGTGGTGGAGGTCGACACCAAGCGCATGAAGCTGGGCGACGGCATCAAGCGGTACAACGATCTTTCCTACATCAGCGGCGCGGCCATCATCACCCTGTCGGCGCCGCCGACCGCGGCGACCGGCAATGATGGGGAGTACGCCATCTGGCCGAACAACGGTAATCCCATCCTGTACGGGCCCAAGGTCAACGGCGCTTGGCCCGCCGGCGTCTCGCTGAAGGGTCCGCAGGGCGATCGTGGGCCGACCGGTTCAACTGGCCCGCAAGGGCAGCAGGGCCTGTCGGCCTACCAGGTAGCGGTGGCCAACGGCTTTGCGGGTACCCAGGCGCAGTGGTTGGCCAGCCTGAAGGGCGAGAAAGGCGACCGAGGCGAGCAGGGCCCGGCGGGTATCTCCGCCGATCGCCGCGTGCAGGTGATCGCCAACAGCGGAACCGGCACGGTGGCCTGCGATTGGGACGCATACGACGAAATCCGGGTGACGGTTACCACCGACACCACTTTCACTTTCAGCGGTGCGCGGAATGGGCAGGGCTGCATGCTGAAGATTCGCCAGGACAGTACCGGCGGCCACACCATCGCCCTGCCGGTGCTGGTGATGCGGTTCAATCTGAATATCCCGTCGTACAACCCGAGCCTGGGCGCCAACGTCTCCGACCTGCTGGGCTTCCGATACGATGGCACCGATTCGCGCTATGACCTGATCGCGCTGACGCGAGGTATCCCTGGAACGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e806296e62b473a5d56a059e093f5b5bf29d3c1f11d41e5000f0d6921d13127d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9040
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Xanthomonas phage HXX_Dennis (obtained as HER103 from the Felix d'Herelle Reference Center for Bacterial Viruses) McCutcheon,J.G. and Dennis,J. 2010-04-23 — GenBank