Protein

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Genbank accession
YP_009286819.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MYSVQIAVSDGSLSRIALSIEYFEKDDISLYRNLSTVPMVLGDDWQWDGDAHINLLSDVPVPNGGYITVRRNTNIDRAFNIYDGGAAFTRDTLDENFKQMIYLAQEFTEGNGLTGLFFPLNMNGFKITNLGDGTDDKDAINKGQLDGVSDRVSSLEGTFVTGTTSYPWYTITTEPTLVFSPPFLFTKAALYLNGVCQVPGLSYSVSNNQIRLATNVAPGTVVFARLGEDTDAATEGVTQAQFLALMARVEALENP
Physico‐chemical
properties
protein length:255 AA
molecular weight: 27886,85240 Da
isoelectric point:4,28642
aromaticity:0,10588
hydropathy:-0,09176

Domains

Domains [InterPro]
DC_1609
STR
1–251
DC_1609
IPR011049
STR
114–149
IPR011049 IPR008635
IPR008635
RBD
126–162
IPR008635
G3DSA:6.10.250.2040
STR
127–178
G3DSA:6.10.250.2040
YP_009286819.1
1 255
Architecture
STR
STR 1-251 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PP16
[NCBI] 		1873958 Uroviricota > Caudoviricetes > Autographivirales > Corkvirinae > Kotilavirus
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009286819.1 [NCBI]
Genbank nucleotide accession
NC_031068.2 [NCBI]
CDS location
range 37114 -> 37881
strand +
CDS
ATGTATTCAGTTCAGATTGCTGTATCTGATGGTTCGCTATCCCGAATTGCTCTGAGTATTGAGTACTTCGAGAAGGACGACATTTCACTGTACCGCAATCTGTCCACTGTACCTATGGTGCTGGGCGACGATTGGCAGTGGGATGGTGATGCACACATCAACCTGCTATCTGACGTACCAGTACCTAATGGTGGGTACATCACAGTACGTCGTAACACTAATATTGACCGGGCGTTCAACATCTATGACGGTGGTGCTGCATTTACGCGGGACACGTTAGATGAGAACTTTAAGCAGATGATTTACCTAGCACAAGAGTTTACTGAGGGGAACGGCCTTACGGGGCTGTTCTTCCCACTGAACATGAATGGGTTCAAAATCACAAACCTCGGTGATGGTACTGATGATAAGGACGCCATTAACAAAGGGCAGTTGGATGGGGTAAGCGACAGGGTATCCAGTCTGGAAGGAACCTTCGTAACGGGTACCACCAGTTATCCGTGGTACACTATCACGACGGAGCCTACCTTGGTGTTTTCGCCGCCGTTCCTGTTTACTAAGGCAGCGTTATACCTTAACGGTGTGTGCCAAGTACCGGGTCTTAGTTACTCGGTGTCAAACAACCAGATTAGACTAGCCACTAATGTAGCCCCCGGCACTGTTGTATTTGCACGTTTAGGTGAGGACACAGACGCTGCGACGGAAGGGGTTACACAGGCACAGTTCCTAGCGCTGATGGCGCGTGTAGAGGCACTGGAGAATCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ecfdea6d5c67eb744cfa4df60352e89b34fae40778e00b86d62ee88a04bdb5ff
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8406
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50