Protein

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Genbank accession
WVO01412.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,74
Protein sequence
MTSIQRIKGANGVIIDSNAYLELPKAQTKSTQDAIRSGMIRYNKGWKAFEGVIDFDDGTVAYRRFANLDDNGRLLVSQLPESVTSGMVYKGTFDPIQDDIDPPFTYAALPAPASSLSGQYFIVRSIQDYASKHLAENPTTAPFVIFTQTNAGGNWIQIKYYIGKDPSTGTNTVVTYAFARFITASIPSTGHAGILALANGDVNLTTAFNNNNDPSAELALSDSDWVIYTSTSIQRLRQSRVSIMASSVSFDSTVMRSVKRPFITNSASTQAVIDNMIIYGLRRTGDSMTNDGSVGSGRLGITYGTATAPSIAFNDGNSDPDLNSGMIPSEWTDSKTGIFRQAAGSIGFSSNGTEKVRINDIGLTILEATNVNPSNNPAFQFQGAGNTSNPGITGINDTITFSVKSKNQVEFKDSLSLFHGAVNIDGTITIGGDLVVEKNTNLKGNVIIGTNASNTLTINSVSTFQANTTFNGTSNRLKNISLMNAGTFTFENNTSPTVITQTETVLNINPTNKADVTINDGDTVRTKFNQYGVKLPILNPVDNAVGEDGMIAYSTQRNTVMQKSNGAWTTVSGGGVEQAFTTSTWVENGNYYTITVPNANIQSIQVQELNGSNYSQVEVDSISIGTASATVSIPRTPDWRFEGRLIITYR
Physico‐chemical
properties
protein length:650 AA
molecular weight: 69870,78030 Da
isoelectric point:5,17800
aromaticity:0,08308
hydropathy:-0,24415

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVO01412.1
1 650
Domain Start End Length (AA) Confidence
N-terminal 1 361 361 0,4989
Central domain 362 560 200 0,2528
C-terminal 561 650 89 0,9952
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-361
Central
362-560
C-terminal
561-650

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PHA46
[NCBI] 		3117424 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium str. ATCC 14028
[NCBI] 		1299114 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVO01412.1 [NCBI]
Genbank nucleotide accession
PP191103 [NCBI]
CDS location
range 192096 -> 194048
strand -
CDS
ATGACTAGTATACAAAGAATAAAAGGTGCCAATGGTGTAATTATTGATAGTAATGCATATCTTGAATTACCAAAAGCACAAACAAAATCTACACAAGATGCTATTCGTAGTGGTATGATTCGCTATAATAAAGGTTGGAAAGCGTTTGAAGGTGTCATAGATTTCGACGATGGCACAGTTGCATATCGCCGCTTTGCTAATTTAGATGATAATGGTCGTCTATTAGTATCCCAACTTCCCGAATCAGTTACTAGTGGAATGGTATATAAAGGAACTTTTGACCCTATACAGGATGATATCGATCCACCATTTACTTACGCAGCGTTACCAGCCCCTGCAAGTTCTTTAAGTGGTCAGTACTTTATTGTTAGATCAATACAAGATTACGCATCTAAACACCTTGCAGAAAACCCAACAACTGCACCATTTGTTATCTTTACGCAAACTAATGCAGGTGGGAATTGGATACAAATTAAGTACTATATCGGCAAAGATCCAAGTACCGGTACAAACACTGTAGTAACATATGCATTTGCCAGATTTATCACTGCAAGTATTCCTAGTACTGGACATGCTGGCATTTTAGCACTAGCTAATGGTGATGTAAATTTAACTACTGCATTTAATAACAACAATGATCCTTCAGCAGAATTAGCTCTATCCGATTCAGATTGGGTAATTTATACTTCAACTAGTATTCAACGTCTACGTCAAAGTCGCGTTAGTATTATGGCATCTTCTGTATCATTTGATAGTACAGTAATGCGTTCTGTAAAGCGTCCATTCATTACTAACTCAGCATCAACACAAGCAGTCATTGATAACATGATTATATATGGTCTACGTCGCACAGGAGACTCCATGACCAACGATGGATCGGTGGGTTCAGGTCGGTTAGGTATCACATACGGAACCGCCACAGCCCCGTCTATTGCGTTTAATGATGGTAATAGTGATCCTGATTTAAATAGCGGGATGATTCCAAGCGAATGGACTGATTCAAAGACTGGTATTTTCCGCCAAGCGGCAGGAAGTATTGGTTTTAGTAGTAATGGTACAGAAAAAGTACGTATTAATGATATAGGTTTAACTATTCTAGAAGCCACTAATGTAAATCCATCTAATAATCCAGCATTTCAATTCCAAGGTGCTGGTAATACTTCTAATCCGGGAATTACTGGTATTAATGATACGATTACTTTTAGTGTTAAATCTAAAAACCAAGTTGAATTTAAAGATTCTTTAAGTTTATTCCACGGTGCAGTGAACATCGACGGAACTATTACTATTGGTGGTGATTTAGTTGTTGAGAAAAATACCAACTTAAAAGGTAATGTTATTATTGGTACAAATGCGTCCAATACATTAACTATAAATTCTGTTAGTACTTTTCAAGCAAATACAACGTTTAACGGAACCAGTAATAGATTAAAAAATATTTCTTTAATGAATGCTGGTACATTTACATTTGAAAATAATACATCACCAACTGTCATTACACAAACTGAAACTGTACTTAATATTAACCCAACAAATAAGGCTGACGTTACTATTAATGATGGTGATACGGTAAGGACGAAATTCAATCAGTACGGTGTTAAACTACCAATTCTTAATCCAGTAGATAATGCAGTCGGTGAAGATGGCATGATCGCTTATAGTACTCAACGTAATACAGTAATGCAGAAATCAAATGGTGCATGGACTACAGTTAGTGGTGGTGGGGTTGAACAAGCATTTACAACCTCTACATGGGTGGAAAATGGTAATTATTATACTATTACCGTACCTAATGCTAATATTCAAAGTATTCAAGTACAAGAACTTAATGGAAGCAATTATAGTCAAGTTGAAGTTGATAGTATATCTATTGGAACTGCAAGTGCAACGGTTTCAATCCCTAGAACACCAGATTGGCGTTTCGAGGGACGATTAATCATCACATACAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7997e82a8e57720eb90fd1db71488553382d558c3e42ff9313cf623c1d7cf0d5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5047
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and efficacy of Salmonella phage PHA46 cocktail in the control of Salmonella Newport and Typhimurium internalized into cherry tomatoes Arista-Regalado,A.D., Viera-Segura,O., Aguilar-Montes de Oca,S., Hernandez,L., Gonzalez-Aguilar,D. and Barba-Leon,J. 2024-07 — GenBank