Protein

View in Explore
Genbank accession
AUR86035.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,66
TF
Evidence RBPdetect2
Probability 0,82
Protein sequence
MAELRATTAIGGNLVWHGGNLRFDPQGETIRYLDHKIFTEHDKPDPHTDLTESVVKRAGDTMSGSLTLGENNLQFTGIASASGDITWYNGATQQGRIWNSSSTSLSISSAVSTSTTGTGVLNLSGTSLKYSGSEVFTAASYNTLDDRYTRKASPETVTAPWLFTSAPLMSGDVANTTSSSEGVDLGSGTDSTKYASIYSNSAGANVYIRNGTHYGAHYLGITNNVPVYDGARLTRVNQAESITGAWTFNGEVTHNSHVRLNAGDWLWFQYSGKNSIRVNHNGSTNRLDIYDQDASAFASVSVGALIATSASVSGSIAAGAASITGQIRSGEQISIGGGFGGAHQVIHNDGTNVLLGNTTRGLKTYKDLTTNTGGYSYLHAGNYSTTLNPIYVNKTGDTMTGDLVIAKSNGDIHISSSANTDAFIRMTEDSSNHGAAFGYEGTINQWQIKRRNATVDSIVMYGNRSDSNVQVAGNIFANNTSRVFADNYHPNADRWTTARTLTTTLTGDVTGSASMSVTGAGNTTVTVNTTVANDSHTHDGRYYTETESNARFLGISANAVSATKLVTARTINGTSFNGTANITTANWGTARTLTIGNTGKSVNGSGNVSWSLSEMGIGHTGSVISKVVDNAGTRDLYIILNTYASNGFSGTIWTNRKSGNTQRYKIDVQAVNTTTAGDNGSYHLKWDAAQSNISMEIVRVMYQNVEHLAVVVRNVNQYQRPVYAVYVNSNTANAMVPVMIMADHADIGAESAVVTTQPSYSNTWNFSSQRFSSLLYENGNRVYSAANTNIGTGSTNYAAGSHTHTPSQVGLSNVPNTVHTTAATANTVAVRDGSGDINVRLLRPSYGNQTTISGAMAFRINNSSDNFVRFCSDTTAIRTWIGAAASSHTHSYLPLTGGTVTSNLTVNGTLSVRTAIDLADNDILRFGSGDDVEFFCNGSHMYTDLNSGIGNWYIRDGTTTRFTFDDAGHFTATGNITAGDFKTDGSIILNNSTTTANISTIVTNNSTGRQSLNLYGGSSHGGGAWAIAYGNSDASYAGSLRLGAGSTTSHKMIIHSTGGDIVGNLSATGNVSAYSDIKLKDDIEAIENSLDKIVQLRGVTYTRNDVEGRPRQSGVIAQEVQKVLPEVVVTHTDEDTGEETLSVAYGNMVGLLIEGIKEERACREQLEARLERLERPWWKRLFS
Physico‐chemical
properties
protein length:1183 AA
molecular weight: 126038,63250 Da
isoelectric point:6,05457
aromaticity:0,07861
hydropathy:-0,32730

Domains

Domains [InterPro]
DC_0505
ATT
1–332
DC_0505 IPR005601 IPR030392 Coil
DC_0056
ATT
452–1182
DC_0056
IPR030392
CHP
1075–1170
IPR030392
AUR86035.1
1 1183
Architecture
ATT
STR
ATT
ATT 1-332 | STR 395-451 | ATT 452-1182 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR86035.1
1 1183
Domain Start End Length (AA) Confidence
N-terminal 1 24 24 0,8677
Central domain 25 223 200 0,2109
C-terminal 224 1183 959 0,8732
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-24
Central
25-223
C-terminal
224-1183

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.081.O._10N.286.52.C2
[NCBI] 		2070722 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shewanella
[NCBI] 		22 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR86035.1 [NCBI]
Genbank nucleotide accession
MG592456 [NCBI]
CDS location
range 185811 -> 189362
strand -
CDS
ATGGCAGAATTAAGAGCAACAACCGCGATCGGCGGCAATCTAGTATGGCACGGAGGAAACTTGCGTTTTGATCCGCAAGGTGAAACAATCCGCTATCTCGATCATAAAATTTTTACAGAACACGACAAGCCAGATCCCCATACTGATTTAACCGAATCGGTAGTGAAGCGTGCTGGTGATACAATGAGCGGCAGCCTGACTCTAGGTGAAAATAATTTGCAATTTACCGGGATTGCCTCCGCATCCGGTGACATCACATGGTATAACGGTGCGACACAACAAGGGCGCATATGGAACTCGTCTAGTACATCCTTGTCAATTTCGAGTGCTGTTAGCACTTCTACTACGGGCACTGGCGTGTTGAATCTTAGCGGGACGTCTCTGAAATACTCAGGCAGCGAAGTTTTCACAGCAGCCAGTTATAACACTCTAGACGATCGTTATACCAGAAAGGCATCGCCAGAAACTGTAACGGCCCCTTGGCTGTTCACGTCTGCGCCTCTGATGTCAGGGGATGTTGCAAACACTACTTCCTCATCAGAAGGCGTGGATCTAGGATCTGGCACTGACTCCACTAAGTATGCGTCGATTTATAGTAATAGCGCTGGGGCTAACGTTTACATTCGTAATGGAACTCATTACGGGGCGCACTATCTTGGTATTACGAACAATGTACCCGTATATGACGGCGCTCGTTTAACTCGTGTGAATCAAGCAGAGTCGATTACGGGTGCGTGGACGTTTAATGGCGAAGTGACGCATAACTCTCATGTTAGATTGAATGCTGGTGATTGGCTGTGGTTTCAATATTCGGGTAAAAATAGCATTCGCGTGAATCATAATGGGTCAACAAATCGCCTAGACATATATGACCAAGATGCGAGTGCGTTTGCATCCGTATCTGTAGGTGCTCTGATTGCAACAAGTGCTTCAGTCTCAGGATCGATTGCGGCGGGGGCTGCTTCAATCACTGGGCAGATACGTTCAGGTGAGCAGATTTCAATCGGTGGTGGATTCGGTGGCGCGCATCAGGTTATTCATAATGATGGGACTAATGTTCTTTTAGGCAACACAACTCGTGGGTTGAAAACTTATAAGGATTTGACTACCAACACGGGTGGATATTCTTATTTGCACGCGGGGAATTACTCAACAACGTTAAACCCGATTTATGTCAATAAAACGGGCGATACAATGACAGGTGACTTGGTAATCGCCAAATCAAATGGCGACATTCATATATCATCTTCAGCAAACACTGATGCATTTATTAGAATGACCGAAGACAGTTCAAATCATGGGGCTGCATTTGGGTACGAGGGGACAATAAACCAATGGCAGATTAAAAGACGTAATGCCACGGTCGACTCGATTGTCATGTATGGTAACAGAAGTGATAGTAATGTTCAGGTTGCAGGCAATATATTCGCTAACAATACATCCCGTGTATTTGCTGATAACTATCACCCAAATGCAGATCGATGGACGACTGCAAGAACTTTAACAACTACATTAACGGGCGATGTTACTGGCTCTGCAAGTATGTCTGTAACAGGTGCTGGCAATACTACTGTGACTGTCAACACGACTGTTGCTAATGACTCGCATACGCACGATGGTCGTTATTACACTGAAACTGAAAGTAATGCAAGATTCTTGGGGATTAGTGCAAACGCAGTTTCTGCAACTAAATTAGTAACAGCAAGAACGATTAACGGGACTAGCTTTAACGGCACTGCTAATATCACTACTGCTAACTGGGGTACTGCTAGAACTTTAACAATAGGCAATACTGGCAAATCAGTAAACGGATCGGGAAATGTTAGTTGGTCTTTGTCAGAAATGGGAATTGGCCATACAGGAAGCGTTATCAGTAAGGTTGTTGACAACGCTGGCACTCGTGATTTGTATATTATACTAAACACGTATGCTTCAAATGGATTTAGTGGGACAATTTGGACAAATCGAAAGAGCGGCAACACTCAACGATACAAAATTGACGTTCAGGCAGTAAATACAACGACTGCTGGTGATAACGGGTCGTATCATCTGAAATGGGACGCGGCGCAATCTAATATATCCATGGAAATCGTTCGAGTGATGTATCAAAACGTTGAGCATTTAGCAGTTGTTGTTAGAAATGTTAATCAATATCAGCGTCCAGTATACGCAGTATACGTGAACTCCAATACTGCTAATGCGATGGTTCCAGTGATGATAATGGCAGACCACGCGGATATTGGTGCTGAATCTGCGGTAGTTACCACACAACCATCGTATTCAAATACTTGGAATTTCAGTTCTCAACGATTTAGTTCGCTATTGTATGAAAACGGTAATCGCGTATACAGTGCGGCCAATACAAACATCGGCACAGGTTCTACTAATTATGCTGCGGGTTCGCATACGCACACTCCATCGCAAGTTGGGTTGAGTAACGTGCCGAATACGGTTCATACCACAGCGGCTACGGCTAACACTGTTGCTGTTCGTGATGGTTCAGGTGATATTAACGTGCGCTTGTTACGCCCTAGCTACGGCAACCAGACCACTATTAGCGGAGCTATGGCTTTTAGGATCAACAACAGCAGCGATAACTTTGTTCGGTTCTGTAGCGACACGACCGCCATTAGAACGTGGATTGGCGCTGCTGCTAGTTCACATACACATAGTTACTTGCCATTAACTGGCGGTACAGTAACTAGTAACTTGACTGTAAATGGTACGTTAAGTGTAAGAACCGCAATTGACTTAGCTGATAATGATATACTACGATTTGGTTCTGGTGATGACGTTGAGTTTTTCTGCAACGGCTCTCACATGTATACTGATTTAAACTCGGGTATAGGCAATTGGTATATTCGTGATGGTACGACGACTCGATTTACATTTGATGATGCAGGCCACTTTACCGCTACGGGTAATATTACGGCAGGAGATTTTAAGACAGATGGTTCGATAATCTTAAATAACAGCACAACTACTGCCAATATCTCAACAATTGTTACTAATAATAGTACGGGTAGACAATCGCTTAATCTTTATGGCGGTAGCTCGCATGGAGGTGGTGCGTGGGCAATCGCTTACGGCAATAGTGACGCATCATACGCTGGATCATTGCGCTTAGGCGCTGGTTCAACAACTTCTCATAAAATGATTATTCATAGCACTGGCGGTGATATTGTTGGAAACCTCTCGGCTACGGGTAACGTATCTGCTTACTCAGATATCAAGTTGAAAGACGATATCGAAGCGATCGAAAATTCGCTTGACAAGATCGTTCAACTGCGTGGTGTGACATACACACGTAATGACGTCGAAGGCAGACCGAGACAATCGGGGGTTATTGCTCAAGAAGTTCAGAAAGTTCTTCCTGAAGTAGTAGTCACGCATACCGACGAAGATACAGGCGAAGAAACATTATCAGTCGCATACGGTAACATGGTTGGGTTATTGATAGAAGGCATCAAAGAAGAACGCGCGTGTCGCGAACAACTTGAAGCTCGACTTGAACGACTTGAACGACCGTGGTGGAAACGTTTGTTTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
561e235006f36d92b834186c67646085e81842adbb2de0a060b6256562000ab3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5133
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank