Protein

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Genbank accession
QDH85441.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,65
Protein sequence
MAQALEGSVPSLLQGVSQQVPRERLQGQVTAMVNCLADPVSGVRRRPIARLISTVEWNVPEASTTQSLYTQYLEDGEGGMHLCIDTSTGRWWLLDDDLKTEISSGTEKYLLSPVEGRHSIQTTSIGGTTYILNTHQKPEAVKDTTGTIDPSTAGWFFVKSGAFSKRYSVTVASGNNRYEVFYETPKGTDTGDAEKTTPEYISTEIEKKLKEKGLTVYRDGTYLFFSDLENAQVESDAGSTYVGVSGRGRVQVESDLPARLPTQADGYLCSVGMRSTALVWYKFNLADRKWDEAGAYGSVTGIKNMPLELKLDGSMSAPVYEGRLAGDEHTNDDPTFLKDKLITGMSTFQGRLVLLSGAYVCMSKSGTPHRFYRGTVTQLLDADRIDIASGSAQNSVFRSAVQFNRDLIILGDSMQAVVPTGSSLLSPNNASLVLTSELSCDSRVGAVPAGQTMLYFSRRTQNYAGALELIPSQYAGSQYISQDATVHIPKYMAGRVYSASTSTVGNMVVMGCTNNLDSLIVYEYQWGADEKLQSAWHTWQFSLNILGFHFAREKLVLFIDFGTTVGICTVDPREGYKSTEFTLDPLIDYPVPVTVKDGQFGIPQHLQHVHTKGYDLVLARAGSSPDYGAEVGIEEVLAGTGTVTRGVPDGEYTLGCRYRSVLAPTPPMLRDENNKVIGAGSVRLLRYNVTLQHSSEFSVHVVDTSRDVDHSGLYTGMLLNSPELSPDKPLLYTLGSVIVPCRTNADTTEMYLVSSSTREMNVLDISYILKYNMRRRRV
Physico‐chemical
properties
protein length:778 AA
molecular weight: 85394,22490 Da
isoelectric point:5,52085
aromaticity:0,08612
hydropathy:-0,24833

Domains

Domains [InterPro]
DC_0058
STR
1–778
DC_0058
IPR058003
TTP
4–778
IPR058003
QDH85441.1
1 778
Architecture
STR
STR 1-778
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDH85441.1
1 778
Domain Start End Length (AA) Confidence
N-terminal 1 148 148 0,9921
Central domain 149 347 200 0,1123
C-terminal 348 778 430 0,1869
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-148
Central
149-347
C-terminal
348-778

Taxonomy

  Name Taxonomy ID Lineage
Phage Proteus phage vB_PmiP_RS1pmA
[NCBI] 		2250312 Uroviricota > Caudoviricetes > Autographivirales > Slopekvirinae > Novosibovirus
Host Proteus mirabilis
[NCBI] 		584 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH85441.1 [NCBI]
Genbank nucleotide accession
MG575418 [NCBI]
CDS location
range 25577 -> 27913
strand +
CDS
ATGGCACAAGCACTAGAAGGGTCTGTACCCTCCCTATTACAAGGGGTATCTCAACAAGTCCCTAGGGAGCGATTACAGGGGCAAGTTACTGCTATGGTTAACTGTCTAGCTGACCCTGTTTCTGGTGTTCGTAGACGTCCTATAGCACGTTTAATCAGTACAGTTGAATGGAATGTACCAGAAGCTAGTACAACCCAATCTTTGTACACACAGTACCTAGAAGATGGTGAAGGCGGAATGCACCTTTGTATTGACACCAGTACAGGGCGTTGGTGGCTACTAGATGATGACTTAAAGACTGAGATTAGTTCTGGTACAGAGAAGTACCTACTAAGCCCAGTAGAGGGTAGACACAGTATTCAGACTACTAGTATAGGTGGTACAACGTACATTCTGAACACTCACCAGAAACCAGAAGCTGTCAAAGATACTACAGGCACAATAGACCCTAGCACTGCCGGTTGGTTCTTTGTTAAATCGGGGGCGTTCAGTAAGAGGTACAGTGTCACAGTGGCTTCTGGTAATAACCGTTACGAAGTGTTCTATGAGACTCCTAAAGGTACTGATACAGGTGATGCTGAGAAGACCACTCCAGAGTACATTAGTACAGAGATTGAGAAGAAACTGAAAGAGAAAGGTTTAACTGTGTACCGTGATGGTACGTACCTGTTCTTCTCTGATTTAGAGAATGCTCAAGTAGAGTCTGATGCTGGTAGTACTTACGTAGGTGTATCTGGTAGGGGTAGGGTTCAAGTTGAATCTGACTTACCTGCACGTCTCCCTACCCAAGCTGATGGGTACTTATGTTCAGTGGGTATGCGTAGTACTGCTCTTGTGTGGTACAAGTTCAACCTAGCTGATAGGAAGTGGGATGAAGCTGGGGCGTACGGTTCAGTTACTGGTATTAAGAACATGCCCCTAGAGTTAAAGCTAGATGGTAGTATGAGTGCCCCTGTGTATGAGGGTAGATTAGCTGGTGATGAACACACTAATGATGATCCTACATTCCTAAAGGATAAACTCATTACTGGTATGAGTACATTCCAAGGTAGGTTAGTACTCCTATCTGGTGCTTATGTGTGTATGAGTAAATCAGGTACACCTCATAGGTTCTACCGGGGTACGGTAACTCAATTACTTGATGCTGATAGAATAGATATTGCTTCTGGTTCAGCACAGAACAGTGTGTTCAGAAGTGCTGTACAGTTCAATAGGGATTTAATTATCCTCGGGGACTCTATGCAAGCTGTCGTGCCTACAGGTAGTTCTTTACTTAGCCCTAACAATGCTAGTCTGGTTCTAACTTCTGAGTTATCATGTGACTCAAGGGTAGGTGCTGTTCCAGCTGGGCAGACTATGCTGTACTTTAGTAGACGTACCCAGAACTACGCAGGTGCTTTAGAGTTAATCCCATCACAGTACGCAGGCTCACAGTACATATCCCAAGATGCTACAGTGCATATCCCTAAGTACATGGCTGGTAGAGTGTACTCTGCTAGTACCAGCACAGTAGGTAATATGGTAGTTATGGGTTGTACCAATAACCTAGACTCCTTGATTGTGTATGAGTACCAGTGGGGTGCTGATGAGAAGCTACAAAGTGCATGGCACACTTGGCAGTTCTCTCTTAATATACTAGGCTTTCACTTTGCTAGGGAGAAGTTAGTACTGTTCATTGACTTTGGTACAACTGTAGGTATCTGTACAGTAGACCCTAGAGAGGGGTACAAGAGTACTGAGTTTACACTAGACCCTTTAATTGACTACCCTGTACCTGTTACAGTAAAAGATGGTCAGTTCGGTATCCCACAGCATTTACAGCATGTACATACCAAAGGTTACGACTTAGTTCTAGCAAGGGCTGGTTCTAGTCCTGACTATGGGGCTGAGGTTGGTATTGAGGAGGTACTGGCTGGTACTGGTACAGTTACTAGAGGTGTTCCAGATGGAGAGTACACACTAGGTTGTAGATACCGTTCTGTACTAGCACCTACTCCTCCTATGCTAAGAGATGAGAACAACAAAGTTATTGGTGCTGGTTCAGTTAGGTTGTTACGGTACAATGTAACATTACAACACAGCTCAGAGTTCAGTGTGCACGTAGTAGATACCAGTAGAGATGTAGACCATTCTGGTCTGTACACTGGAATGCTTTTGAACAGCCCCGAGTTATCCCCAGATAAACCTTTACTGTACACACTAGGAAGTGTTATTGTACCTTGTAGAACTAATGCTGATACCACTGAGATGTACTTAGTAAGTTCAAGTACAAGGGAAATGAATGTCCTAGATATTTCGTACATTCTCAAGTACAACATGCGGAGAAGGAGAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c838e5368be7736f1dd9312ca56dc8fbecd38f161921b0ba0174d18944aae294
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9004
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic and ecogenomic characterisation of Proteus mirabilis bacteriophage supports development of cocktails for phage therapy Alves,D.R., Nzakizwanayo,J., Dedi,C., Olympiou,C., Hanin,A., Kot,W., Hansen,L., Gahan,C., Schellenberge,P., Ogilvie,L.A. and Jones,B.V. 2019-08-06 — GenBank