Protein

View in Explore
Genbank accession
AWD93202.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MAEQKINELPITPPSNFTDNDSFVIIDDNKARLLPRPTLLSWIQDNVQGEKGDQGIAGINGTNGKDGKDGKDGQDGLSAYQIAVNNGFVGTEAQWLASLKGPKGDQGTNGTNGWSPILAVVTTGEKRVLQITGWTGGTGTPPSTGYIGPTGIVTNIANAVDIRGSQGLQGIQGANGANGWNPVLAIANNSSSQQVIRVLDWTGGTGTKPTTGYVSSTGIVATADEATALTVTVSQNDVRSTTLTGLSLSTKTDVVAEDTILAAMGKLQAQLDNLSNQAGQVKVVYSGLTLTNFTANTYKTFDFAAATPTVVSPPTTTYPKSTPNSYLGVFDANRGTSPTGRLIENPISGQIHGWRIQGQFSGKSTSGTSTEVLTLRIRNPVSGFTYVKSITLPNSLSSGTFADELITIADNDSIPSPNGYILEAAMSETDAGLSIQINALTRFSYAKEVYVS
Physico‐chemical
properties
protein length:452 AA
molecular weight: 47232,87980 Da
isoelectric point:4,92813
aromaticity:0,06416
hydropathy:-0,22876

Domains

Domains [InterPro]
IPR050938
Unmapped
48–218
IPR050938
DC_0863
STR
50–167
DC_0863
DC_0863
STR
163–444
DC_0863
AWD93202.1
1 452
Architecture
STR
STR 50-444 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM_B9
[NCBI] 		2163899 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWD93202.1 [NCBI]
Genbank nucleotide accession
MH133207.1 [NCBI]
CDS location
range 24780 -> 26138
strand +
CDS
ATGGCAGAACAAAAAATAAACGAATTACCAATTACACCACCTTCCAATTTCACAGATAATGATAGCTTTGTAATTATTGATGATAATAAAGCAAGGTTACTTCCTAGACCAACATTACTTTCTTGGATTCAAGATAATGTTCAAGGTGAGAAAGGTGATCAAGGTATTGCTGGTATCAATGGTACAAACGGTAAAGATGGTAAAGACGGTAAAGATGGGCAAGATGGATTATCTGCATATCAAATTGCGGTTAATAATGGTTTTGTTGGAACTGAAGCACAATGGTTAGCTTCCTTAAAAGGACCTAAAGGTGATCAAGGAACGAACGGCACAAATGGTTGGAGTCCTATCCTTGCTGTAGTAACAACTGGAGAAAAACGTGTTCTACAAATCACAGGTTGGACAGGTGGAACAGGAACTCCACCGTCTACAGGTTATATAGGTCCTACTGGTATTGTTACTAATATTGCCAATGCTGTTGATATTCGTGGTTCTCAAGGATTACAAGGTATTCAAGGTGCTAATGGTGCAAACGGATGGAATCCTGTTTTAGCAATTGCTAACAATTCTAGTTCACAACAAGTTATTAGAGTTTTAGATTGGACTGGTGGTACTGGTACAAAACCAACAACAGGGTACGTATCTTCAACAGGAATTGTAGCGACAGCAGATGAAGCAACAGCATTGACAGTAACAGTTAGTCAAAATGATGTTAGATCAACGACTCTAACAGGTCTTAGCTTATCAACAAAAACAGATGTTGTTGCAGAAGATACAATATTAGCTGCAATGGGAAAACTACAAGCACAATTAGACAATTTATCAAACCAAGCTGGTCAAGTTAAAGTAGTTTATTCTGGATTAACGTTAACCAATTTTACTGCTAACACATATAAGACTTTTGATTTTGCAGCAGCAACACCTACTGTTGTTTCTCCACCAACCACAACATATCCAAAATCAACACCCAACAGCTACTTAGGTGTATTTGATGCAAATAGAGGAACATCTCCGACAGGTAGATTAATTGAGAATCCTATTAGTGGTCAAATTCACGGTTGGAGAATTCAAGGTCAATTTAGTGGTAAGTCTACGAGTGGAACATCAACAGAAGTTCTAACTTTACGTATTAGAAATCCTGTAAGTGGTTTTACATATGTTAAGTCAATTACGTTACCAAACAGTCTTTCTTCTGGTACGTTTGCAGATGAACTAATTACAATCGCTGACAATGATAGTATTCCTTCCCCAAACGGCTATATTCTTGAAGCAGCAATGTCTGAAACGGATGCTGGGCTATCAATTCAAATTAATGCGTTAACCAGATTCTCTTATGCTAAAGAAGTCTATGTTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c0bc58c935cdf2356cf7bf8e00b8d8fa34d204f796c189ddbf41664cf2448a62
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7059
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A new phage endolysin active against S. aureus biofilms Oliviera,H., Costa,A.R., Ferreira,A., Konstantinidis,N. and Azeredo,J. 2016-06 — GenBank