Protein

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Genbank accession
AUR98312.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
Protein sequence
MSAISSGNNRARLKDLSRKGGRYQISGLPRFLKIIEEYRDDLAPAINIVGMGSSVGNGASLPDPATQAPVMYFGTKFEEYFNKLGIYNFVTTNRSVDGSTMFESIAKFDAILAEPLTPDITLLAYGMNDGATAIYNSGQTFPFVHQKCKELILKAWENGSDVIIMTTPHPLSTDMGWSMPPAVPQNYPTFVAAPVADEDLIPPVSQSIKNGDFLGIGVDLPASHRHYRVNEAFRRVGAELGVHVIDVERYWFEAMLNFGEANLFDPGQYNHPNLLGHQKSYQKAIDDYLESIFYSWGNGGESGGVYGRIGVNTDSPTHALEVHPSDANDDILKIVKNDGTVIGEINAAGNFDLSLLTDIHGPGVRKLGGSSYGSGDYSPEERSLYWGNRDVGTPGTITFGATKGALILVEGYQSGIGRQTKLLMVNTDATTANVTEVSTHRTGAGDTFTVSNTGLTVNIVPVAANTNLKAIWMVM
Physico‐chemical
properties
protein length:475 AA
molecular weight: 51403,15840 Da
isoelectric point:5,17698
aromaticity:0,09263
hydropathy:-0,19326

Domains

Domains [InterPro]
IPR036514
STR
33–289
IPR036514
IPR036514
STR
40–289
IPR036514
SSF52266
STR
46–283
SSF52266
IPR013830
ENZ
65–278
IPR013830
AUR98312.1
1 475
Architecture
STR
STR 33-289 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR98312.1
1 475
Domain Start End Length (AA) Confidence
N-terminal 1 68 68 0,1405
Central domain 69 267 200 0,5857
C-terminal 268 475 207 0,7888
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-68
Central
69-267
C-terminal
268-475

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.249.A._10N.261.55.B9
[NCBI] 		1881268 Viruses > Varidnaviria > Abadenavirae > Produgelaviricota > Belvinaviricetes
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR98312.1 [NCBI]
Genbank nucleotide accession
MG592615.1 [NCBI]
CDS location
range 8151 -> 9578
strand +
CDS
ATGTCTGCTATATCATCAGGTAACAACCGAGCGCGTCTTAAAGACCTAAGCCGAAAAGGCGGGCGATATCAAATTTCAGGTCTACCACGTTTTTTAAAAATTATCGAAGAATACCGCGACGACTTAGCCCCGGCCATTAATATAGTGGGAATGGGTTCGAGTGTGGGAAATGGGGCAAGTTTGCCCGACCCGGCTACACAAGCCCCGGTTATGTATTTCGGTACAAAATTCGAAGAATACTTCAACAAACTAGGTATTTACAATTTTGTAACGACTAACCGAAGTGTAGATGGTTCGACCATGTTCGAATCTATCGCAAAATTTGACGCAATCTTAGCCGAACCATTAACGCCGGATATTACGTTGCTTGCCTATGGTATGAATGACGGGGCGACGGCTATTTATAACAGCGGTCAAACTTTCCCGTTCGTTCACCAAAAATGCAAAGAATTAATTTTAAAAGCGTGGGAAAATGGAAGCGATGTAATTATTATGACAACGCCGCACCCATTAAGTACCGACATGGGTTGGAGTATGCCGCCAGCGGTTCCGCAAAATTACCCAACATTCGTGGCGGCCCCGGTAGCCGACGAAGATTTAATTCCGCCCGTGTCGCAAAGTATTAAAAACGGCGATTTTCTAGGGATAGGTGTAGACCTTCCGGCTAGTCATAGGCATTATCGGGTAAATGAAGCATTCCGCCGCGTTGGTGCTGAGTTGGGCGTTCATGTTATCGACGTTGAACGCTATTGGTTCGAGGCAATGCTAAACTTTGGTGAAGCGAATTTATTCGACCCCGGCCAATACAATCACCCGAATTTATTGGGCCACCAAAAAAGCTACCAAAAAGCAATAGACGACTATTTAGAAAGTATTTTCTATTCGTGGGGCAATGGCGGTGAAAGCGGTGGCGTTTATGGGCGAATCGGCGTTAATACTGATTCGCCTACCCACGCGCTAGAAGTACACCCAAGCGACGCGAACGACGATATTTTAAAAATCGTTAAAAACGACGGTACGGTAATCGGCGAAATAAACGCGGCGGGTAATTTTGATTTGTCACTTTTAACCGATATTCACGGGCCGGGCGTTCGTAAGCTAGGTGGTTCGAGTTATGGAAGCGGTGATTATTCGCCCGAAGAACGAAGCCTATACTGGGGTAATCGCGACGTTGGAACGCCGGGAACAATTACATTCGGCGCGACAAAAGGCGCGTTAATTCTGGTCGAGGGTTATCAGTCTGGTATTGGACGCCAAACAAAATTGTTAATGGTTAATACCGACGCGACAACGGCGAACGTGACGGAAGTTTCAACCCACCGCACCGGGGCGGGCGACACCTTCACCGTGTCAAACACTGGGTTAACTGTTAATATTGTACCCGTCGCGGCAAATACCAACCTTAAAGCTATTTGGATGGTTATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c0876ac2115aa1dff270b009e7f2a7d387492965d2e140d3ca7819870370406
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7152
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank