Protein

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Genbank accession
XLQ26215.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TSP
Evidence RBPdetect
Probability 0,53
TF
Evidence RBPdetect2
Probability 0,58
Protein sequence
MSDLLKQHFRATNGLDAGGNKVINVALADRNVKTDGVSVEYVIQENTIQKYDPTRGYLTDFAVTYGRRIWIANKDIPKPAGDFNQANWTSLRVDPNWIYTVRKGEFEIQSGQFINVDSNAAGNATLLLPLAPDEGDTIVVRDIGGRPGYNGILIKAQDTGASIVFGESRLREVRLTRPYSQIMLTFSNGAWRASLTDFGDTAKMVVPNGIVPTQVQSGDNVVRRYTSNSEIFITLPLFANSNDIINFTDLDGTSPINHMTVRTFDPTISIGTPGQTEVQVRTSGNGFLVYDSIDKIWRIFENDLRTRVRIITSDVTLMPNEHISVFGADNNTVKTINVTLPTDVAVGDTVTIAMNYMRKGQTVVIKASDGDTIASNLNLLQFPKRSEYPPDAAWVQSSSITFNGTTSYVPVLGLAYIEDKASGKSYWIVTESDPTVERVDAKDNTTRARLGVIALATQAQANAESNPEKELAITPETLNGRRSTETQTGIARIATSSEVNQSTTASYLDNVIVTPKKLNERAATETRRGLAEIASNAKMDAGTDDFTIVTPKKLLYRTTSDSRLGVVQLVKTGGAPNTTADRSSAGTGIFDHSDYKNAVTPKTLREYKATVNQSGIVWLATDSEVRNGTPASSNIPTVVTPEALHKKVATDGAIGLIQIATQTEVNAGGVTNKAVTPKTLNDRTATNDRTGIARFATPGAQGEFEAGTSSTVMVNPKLLFDKFANTDRIQVNTSSGLTITGNLWDHYTINIQEASTSQRGTTTLATAAEVRTGTDAKKIVTASTLHAKTATEGAIGLAQYATQAQVDAGTLSDRIVPPAYLKQTIQVTESWQATDSVRGTVRLSTGDGTWKGNDTNGSTLPDNGYASKGVAVSPYELNLTLKHYLPRLGKAYDTGMLGGQTPDKYARRDIAQTISGAWSFSQDTSFSNNISVQNIIYANGGEVKISPTADTGNVHVRFQNRDGSERGIIYAEPQTASAGNLKVRVKNGTGTTAASQTYTFGGNGTLDVPNEVSTKTLRSSGNAIVGGTVMVKDVQMLAVEGLNSIFGAQSQSAFIRSRDADTQIFAQDSTGSYPILTTKNYARLADGRYVKKAGDTMTGNLNLSGSAIVITGSESWYVPTNETVMRQGSWTAEIKDATKLKGLRGYMVPIRTPIDPANPSTLVVTGYEEKTAAGGVLTQVGVTTNNTYQLWTPYPPTTETADKRFAHTVWMRIYNPNLNKFDDWMRVFTSATPPTAADIGAPSSVSTQVKTLEVLEWIKLGPVKIWPDRPNQTLKFEWVGD
Physico‐chemical
properties
protein length:1281 AA
molecular weight: 138440,18650 Da
isoelectric point:6,85702
aromaticity:0,07182
hydropathy:-0,34044

Domains

Domains [InterPro]
DC_1986
ATT
8–137
DC_1986 DC_1209
IPR048391
ATT
1127–1228
IPR048391
XLQ26215.1
1 1281
Architecture
ATT
STR
ATT
STR
ATT 8-137 | STR 348-1126 | ATT 1127-1228 | STR 1229-1270 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XLQ26215.1
1 1281
Domain Start End Length (AA) Confidence
N-terminal 1 843 843 0,8727
Central domain 844 1042 200 0,2346
C-terminal 1043 1281 238 0,6669
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-843
Central
844-1042
C-terminal
1043-1281

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_VIPKPNOM02
[NCBI] 		3350120 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLQ26215.1 [NCBI]
Genbank nucleotide accession
PQ505479 [NCBI]
CDS location
range 148075 -> 151920
strand +
CDS
ATGAGCGATTTACTGAAACAACATTTCCGTGCAACGAACGGCTTGGACGCAGGCGGAAATAAAGTTATAAATGTGGCACTAGCTGACCGCAACGTTAAAACCGACGGCGTCTCCGTCGAGTACGTTATTCAAGAAAACACTATCCAAAAATATGACCCGACACGTGGGTATCTCACTGATTTTGCTGTGACTTATGGACGTCGTATCTGGATTGCAAATAAAGATATTCCAAAGCCTGCTGGAGATTTTAACCAGGCGAATTGGACTTCTTTACGTGTTGACCCGAACTGGATTTATACCGTCCGTAAAGGAGAGTTTGAAATTCAATCTGGCCAGTTCATCAACGTTGACTCTAACGCTGCCGGTAATGCTACATTACTGCTTCCGTTAGCACCAGATGAAGGCGATACCATCGTAGTTCGTGATATTGGCGGCCGTCCTGGCTATAACGGAATCTTAATTAAAGCACAAGATACTGGTGCGTCTATCGTATTTGGTGAATCGCGTCTGCGTGAGGTAAGACTTACACGTCCGTATTCACAAATTATGCTTACGTTTAGTAATGGTGCATGGCGTGCAAGTTTAACCGATTTTGGCGATACTGCTAAAATGGTAGTTCCGAACGGGATTGTTCCAACCCAGGTACAGTCAGGTGATAACGTAGTTCGTCGTTATACTTCCAACTCAGAGATTTTTATTACTCTGCCGTTGTTCGCTAATTCAAACGATATCATCAATTTTACTGACCTTGACGGTACATCGCCAATTAACCATATGACTGTGCGTACGTTTGACCCAACTATCTCGATTGGGACTCCTGGACAAACAGAGGTTCAAGTACGTACTTCAGGTAATGGATTTTTGGTATATGACTCGATTGACAAAATCTGGCGTATTTTTGAAAATGATTTACGCACCCGAGTAAGAATAATTACTTCTGACGTTACTTTAATGCCTAATGAGCATATTTCTGTATTTGGCGCAGATAACAATACCGTTAAAACAATTAACGTTACTTTGCCTACAGACGTAGCTGTTGGGGATACTGTCACAATCGCAATGAATTATATGCGTAAAGGACAGACTGTAGTAATTAAAGCTTCTGATGGTGATACCATCGCGAGTAATTTGAATTTACTGCAATTTCCAAAACGTTCAGAGTATCCACCTGATGCAGCATGGGTGCAATCAAGCTCGATTACCTTTAACGGAACTACATCGTATGTTCCTGTTCTTGGGCTTGCATATATTGAAGATAAAGCATCCGGAAAAAGCTATTGGATTGTAACTGAATCTGACCCTACCGTAGAACGTGTTGATGCTAAAGACAACACAACTAGAGCACGATTAGGTGTTATTGCTCTTGCTACGCAGGCTCAAGCTAATGCGGAGTCAAATCCAGAAAAAGAATTAGCAATTACTCCAGAAACCTTAAATGGACGTCGTTCTACTGAAACCCAAACTGGTATAGCAAGAATTGCAACTTCCAGCGAAGTTAATCAGTCAACAACTGCTTCTTACTTGGATAATGTAATCGTTACTCCTAAAAAGCTTAACGAAAGAGCTGCTACTGAAACTCGTAGAGGTTTAGCTGAAATTGCGTCTAATGCTAAAATGGATGCAGGAACAGACGATTTTACAATTGTTACTCCTAAGAAGTTGCTTTATCGTACTACATCAGATTCACGATTAGGTGTTGTTCAGTTAGTAAAAACTGGTGGTGCTCCTAACACAACTGCTGATCGTTCTTCTGCTGGCACCGGTATATTCGATCATTCTGATTACAAAAATGCAGTTACTCCAAAAACTCTTCGTGAGTATAAAGCTACTGTAAACCAATCAGGAATAGTCTGGTTAGCAACTGATAGCGAAGTTAGAAACGGAACTCCGGCTTCTTCAAATATTCCTACGGTCGTTACACCAGAAGCTTTGCATAAAAAAGTTGCTACTGACGGAGCAATTGGATTAATCCAAATAGCTACGCAGACGGAAGTTAATGCTGGCGGCGTGACTAATAAAGCAGTTACACCTAAAACATTAAATGACCGTACAGCAACTAACGATCGTACTGGTATTGCTCGCTTCGCGACACCTGGTGCCCAGGGTGAATTTGAAGCTGGTACTTCAAGTACAGTAATGGTAAACCCTAAATTACTGTTCGATAAATTTGCTAATACTGATCGTATCCAAGTTAATACTAGTTCTGGCTTAACTATTACTGGGAACCTCTGGGACCATTATACCATCAACATACAGGAAGCAAGTACTTCTCAAAGAGGTACAACCACTCTTGCAACTGCTGCTGAGGTTAGAACCGGCACCGACGCCAAGAAAATAGTTACTGCTTCCACGCTACATGCTAAAACAGCAACTGAAGGAGCTATCGGTCTTGCTCAGTATGCTACACAGGCACAGGTTGATGCAGGCACATTAAGTGATAGAATTGTTCCTCCTGCTTACTTGAAACAGACTATTCAGGTAACAGAGTCATGGCAAGCTACAGACAGCGTTAGAGGGACCGTCAGGCTATCTACAGGCGATGGAACGTGGAAAGGTAATGATACCAATGGCTCAACTCTTCCGGATAACGGGTATGCCTCTAAGGGCGTCGCAGTGTCTCCGTATGAATTGAACCTTACACTGAAACATTACTTGCCTCGTCTCGGTAAAGCCTATGACACCGGAATGCTAGGTGGTCAAACCCCAGACAAATATGCTCGCCGCGATATAGCGCAGACTATTTCTGGAGCTTGGTCATTTAGTCAGGACACTTCATTTAGCAATAATATTTCTGTTCAGAATATTATATATGCTAATGGCGGTGAAGTTAAAATTTCACCAACTGCTGACACTGGAAATGTGCATGTTCGTTTTCAGAATAGAGATGGAAGCGAGCGTGGTATAATTTATGCTGAGCCACAAACTGCTTCAGCTGGAAACTTAAAAGTTCGCGTAAAAAACGGAACAGGAACTACTGCTGCAAGCCAGACCTACACATTTGGCGGTAACGGTACTTTAGATGTTCCTAATGAAGTATCAACTAAAACCCTGAGGTCTTCTGGAAATGCAATAGTTGGCGGAACTGTTATGGTTAAGGACGTTCAGATGCTTGCTGTCGAGGGATTGAATTCAATATTCGGTGCCCAATCACAGTCCGCATTTATTCGTTCCCGTGACGCTGATACACAAATTTTTGCACAGGATTCAACTGGATCGTATCCAATTTTAACTACCAAAAACTATGCAAGATTAGCTGATGGTCGTTATGTTAAGAAAGCTGGTGATACCATGACCGGCAATCTTAACTTAAGCGGTTCTGCTATCGTCATTACAGGTTCTGAATCATGGTATGTTCCAACAAATGAAACTGTAATGAGACAAGGTTCTTGGACTGCTGAAATTAAAGACGCTACTAAACTAAAAGGTCTTCGCGGTTATATGGTTCCGATCAGAACACCGATTGACCCTGCTAATCCAAGCACATTAGTAGTGACTGGGTATGAAGAAAAAACTGCAGCTGGTGGTGTTTTAACTCAGGTTGGTGTAACTACAAACAATACTTATCAGCTTTGGACACCTTATCCTCCGACAACCGAAACTGCTGATAAGCGTTTCGCGCATACTGTGTGGATGAGGATTTATAATCCAAACCTTAATAAGTTTGATGATTGGATGCGAGTATTTACATCTGCTACTCCTCCAACTGCAGCTGATATCGGAGCTCCAAGTTCAGTATCAACTCAGGTTAAAACCCTTGAAGTTTTGGAATGGATTAAGCTTGGTCCAGTTAAAATCTGGCCAGACCGTCCAAACCAAACTCTCAAATTTGAATGGGTAGGTGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
18e04444642b87888ae644b619b26142c988b57a9953ebadd53ea5a5eab24172
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2801
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50