Protein

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Genbank accession
WDS30440.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MRPFFCPYNGRNKYHKKERQMTKKVISGSKGGSAKPHTPKEMADNLISINKIKILLAVSDGECDPDFSLKNLYLDDVPVQNEDGSYNYQGVTAEFRPGTQTQSYIKGFTDSSSEITLQRVITNDNPYVISVTDKNLSALRIKMMIPQGVKVENDGDRVGISVTYRVDMAVDGGAYKTVLTDTISGKTTSGYDRSRRVDLPDFNDQVLVRVSRVTPDSTNSNVVDTIRLQSYANVIDAKFRYPLTGIVYVEFDSELFPNQIPTISVKKRWKLINVPSNYDTELREYSGTWDGTWKKAWSNNPAFVLYDLITNQRYGLDQKELGIAIDKWSIYEAAQYCDQKVPDGKGGTEPRYLCDVVIQNQVEAYQLVRDICSIFRGMSFWNGESLSIIIDRPRDPSYLFTNENVVNGDFSYTYASEKSMYTQCNVTFDDEQNMYKQDVEGVFDVEASMRFGYNPTSITAIGCTRRSEANRRGRWILKTNLRSTTVNFATGLEGMIPTIGDVIAIADNFWSSALTLSLSGRVAEVSGLQVFLNYKVDARAGDFIIVNRPDGKPVRRTISKVSSDGKTISINTGFGFDVMPDAVFAIERTDIALQQYVVTKITRGDDQEEFTYSITAVQYDPNKYDEIDYGVNIDDRPTSNVTPDQLEKPKNVKVSSYSRVVQGISVETMRVTWDKVPYASLYEMQWRKGDGDWNNTPQTSNKEIEVEGIYAGNYGVRVRAVSAQGSASVWSDIVNVSLKGKVGEPGAPVNMTASDDEVFGIRVKWGFAPDSGDTAYTELQQAPNGADGHPIEDQATLLTMVPYPQYDYWHSILPAGYVNWYRARTVDRIGNVSPWSEFVRGMASDDTSIITDHIKVDIEGSDGFKWLKENAIAANDKIHSSAEAAIENALANDADVRIQQVKNGKFRAQIKESLKLIASETEARVTQVSQLQAEVEGEMSAMNTELREVIANGDQALSQSIQDLKAQIGDDIQGQITQVQQAIATETEARVSADTALSARLGNNEAALNEKLDSWSNATSTGAMYGVKLGLRYNGKEYDAGLALSLVGSGTAVKSQLLVSADRFAVISNASSNSFALPFVVEGSQVFINSLFVKDGTITNAKIGSFLQSNNYVAGTSGWRIDKNGNFEINGSGGTGRMRITNNIVQIWDANNVLRVRMGLF
Physico‐chemical
properties
protein length:1161 AA
molecular weight: 128716,51260 Da
isoelectric point:5,10115
aromaticity:0,09130
hydropathy:-0,39053

Domains

Domains [InterPro]
DC_0014
STR
7–1161
DC_0014
IPR053171
Unmapped
22–897
IPR053171 IPR015406
IPR055385
ATT
112–237
IPR055385 IPR032876 IPR036116
IPR003961
STR
647–736
IPR003961
IPR013783
STR
647–738
IPR013783
WDS30440.1
1 1161
Architecture
STR
ATT
STR
ATT
STR
STR 7-111 | ATT 112-237 | STR 238-359 | ATT 360-511 | STR 512-1161
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS30440.1
1 1161
Domain Start End Length (AA) Confidence
N-terminal 1 526 526 0,9164
Central domain 527 1102 577 0,0451
C-terminal 1103 1161 58 0,9138
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-526
Central
527-1102
C-terminal
1103-1161

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage SG01
[NCBI] 		2973489 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS30440.1 [NCBI]
Genbank nucleotide accession
OP120783.1 [NCBI]
CDS location
range 14318 -> 17803
strand +
CDS
GTGCGGCCTTTTTTTTGCCCGTATAATGGCCGCAATAAATACCACAAAAAGGAAAGACAGATGACGAAGAAAGTGATATCGGGCAGCAAGGGCGGCAGCGCGAAGCCGCATACTCCAAAAGAAATGGCTGACAACCTGATCTCGATCAACAAAATTAAAATCCTTCTCGCCGTTTCTGATGGCGAATGCGACCCTGATTTTTCTCTCAAAAATCTTTATCTTGATGACGTTCCGGTTCAAAACGAGGATGGCAGCTACAACTACCAGGGCGTCACCGCAGAGTTCAGGCCAGGCACGCAGACTCAGAGCTATATCAAGGGGTTCACAGATAGCTCAAGCGAGATCACATTGCAGCGAGTCATTACCAATGACAATCCTTACGTCATATCAGTTACCGACAAAAACCTTTCTGCGCTGAGAATCAAGATGATGATCCCGCAGGGCGTGAAGGTTGAAAATGACGGCGACCGAGTAGGCATCAGTGTTACTTATCGTGTTGATATGGCCGTTGACGGCGGGGCATATAAAACCGTTTTAACTGATACGATATCCGGGAAAACGACCAGCGGATATGACCGAAGCCGTCGCGTTGACTTACCGGACTTTAACGATCAGGTTTTGGTTCGCGTGTCTCGCGTGACGCCGGACAGCACAAATTCTAACGTTGTGGATACGATCCGCCTACAAAGCTACGCGAACGTTATCGACGCCAAATTCCGCTATCCTCTGACAGGTATTGTGTACGTCGAATTTGATTCCGAGCTGTTCCCTAATCAGATCCCAACCATATCTGTCAAGAAGCGCTGGAAGCTTATTAACGTGCCGAGCAATTATGACACGGAGTTGCGCGAGTATTCCGGCACTTGGGATGGAACATGGAAGAAGGCGTGGAGCAACAACCCGGCATTCGTGCTTTATGACCTGATAACCAATCAGCGCTATGGTCTCGATCAGAAAGAGCTTGGCATCGCCATTGATAAATGGAGCATTTACGAAGCGGCCCAATACTGCGATCAGAAAGTGCCTGACGGGAAAGGCGGAACGGAGCCGCGCTATCTGTGCGACGTGGTGATCCAGAATCAGGTAGAGGCTTACCAGCTTGTGCGCGATATTTGCTCTATCTTTCGCGGAATGAGTTTTTGGAACGGCGAGAGCTTGTCTATCATCATCGACAGGCCGCGCGATCCGTCTTACCTGTTTACGAATGAAAACGTTGTAAACGGAGATTTCAGTTACACCTACGCCAGCGAAAAGAGCATGTACACGCAGTGCAACGTCACCTTTGATGATGAGCAAAATATGTACAAACAGGATGTCGAAGGTGTTTTCGACGTTGAAGCATCCATGCGATTTGGTTACAACCCGACCAGCATTACAGCCATCGGTTGCACGCGCAGGAGCGAGGCTAACAGACGCGGGCGCTGGATACTAAAAACCAACCTTCGCAGCACGACAGTAAACTTTGCAACCGGACTTGAGGGCATGATACCGACAATTGGCGATGTTATCGCGATTGCGGACAACTTCTGGAGTAGCGCGCTTACACTTAGCCTTTCCGGGCGCGTGGCAGAGGTTAGCGGCTTGCAAGTTTTCCTGAACTATAAAGTTGATGCCCGAGCAGGTGACTTTATCATCGTCAACCGACCTGACGGTAAGCCTGTGCGCCGCACCATCTCAAAGGTGAGCAGCGACGGCAAAACCATAAGCATAAATACCGGGTTCGGTTTTGATGTTATGCCAGATGCTGTTTTTGCCATTGAGCGTACAGATATCGCGTTGCAGCAGTATGTGGTGACAAAAATCACTCGTGGCGATGACCAGGAGGAATTTACCTACAGCATAACGGCGGTTCAGTACGATCCGAACAAATACGACGAGATTGACTATGGCGTCAATATTGATGACCGGCCAACAAGTAACGTGACGCCAGATCAGCTTGAGAAACCGAAAAACGTTAAGGTTTCTTCATATTCTCGCGTAGTGCAGGGAATCAGCGTTGAAACCATGCGCGTAACCTGGGATAAGGTTCCATACGCCAGCCTTTATGAGATGCAATGGCGCAAAGGGGATGGTGACTGGAACAACACGCCGCAGACGTCCAACAAGGAAATAGAGGTAGAGGGTATCTATGCCGGCAACTACGGCGTAAGGGTTCGCGCTGTTTCAGCGCAGGGCAGCGCTTCCGTCTGGTCAGATATTGTGAACGTGTCGCTAAAAGGCAAAGTTGGAGAGCCTGGCGCGCCGGTCAACATGACGGCTTCTGATGATGAGGTTTTCGGCATCCGGGTTAAGTGGGGATTTGCGCCAGACTCCGGAGATACAGCTTACACCGAATTGCAGCAGGCACCGAACGGCGCAGATGGTCATCCTATTGAGGATCAGGCAACGCTGTTAACGATGGTTCCATATCCGCAATATGACTACTGGCATAGCATTCTCCCGGCTGGCTATGTTAACTGGTACAGGGCGCGAACTGTGGATCGCATAGGAAACGTGTCGCCGTGGAGTGAGTTCGTAAGGGGCATGGCGTCGGACGACACCAGCATCATAACGGATCACATTAAGGTTGATATCGAAGGTTCTGACGGCTTCAAATGGTTGAAGGAAAATGCGATTGCGGCCAATGACAAGATCCACTCATCGGCGGAGGCGGCCATTGAAAACGCCTTAGCTAATGATGCCGATGTTCGCATTCAGCAGGTTAAAAATGGTAAGTTCAGGGCGCAAATCAAAGAGAGCCTAAAACTCATCGCCAGCGAAACAGAGGCCCGCGTGACGCAGGTTTCACAATTGCAGGCGGAGGTTGAAGGAGAAATGTCGGCCATGAATACCGAACTGCGAGAGGTTATCGCAAACGGAGATCAGGCGCTCTCTCAATCCATCCAGGATCTGAAAGCGCAAATTGGCGACGATATCCAGGGTCAGATAACGCAGGTTCAGCAGGCGATAGCAACGGAAACCGAAGCCAGGGTTTCGGCAGATACCGCATTATCAGCGCGTCTTGGCAACAATGAGGCAGCGCTGAATGAGAAGCTTGATTCGTGGTCTAACGCAACCTCAACCGGCGCTATGTATGGCGTCAAGCTTGGTCTCCGGTATAACGGAAAAGAGTATGACGCCGGGCTTGCATTGTCGCTTGTGGGTTCTGGAACTGCGGTTAAATCGCAATTGCTGGTTAGCGCTGACCGGTTCGCCGTTATCAGCAATGCTTCGTCGAACTCTTTCGCGCTGCCGTTCGTTGTTGAGGGATCGCAGGTGTTTATTAACAGCCTTTTCGTTAAGGATGGAACAATAACAAACGCCAAAATAGGCTCGTTTTTGCAGTCAAATAACTATGTCGCAGGCACTAGCGGATGGAGAATTGACAAAAACGGAAACTTTGAGATTAACGGAAGCGGTGGAACTGGTAGAATGAGGATTACCAATAACATTGTGCAGATATGGGATGCAAACAACGTTCTGCGCGTAAGAATGGGGCTTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
77a3c3c10d99aaf284495066638a0d7718decc5d247b9e1639fbe419a18664ea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7903
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50