Protein

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Genbank accession
QQM15480.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKVGGSYDSVVLGVSQQTPQDRRSGQMWEQVNMVSDPVQGLTRRHGSVFEAKQDLKAGTVNTNWLREAAVKFKVRPFSIGGIDYDLIYSNEYVRGNITEVLPVYCYDKTNKKFIPVKGSGDVWGALVANGASAVVNIGSYLFLSAKGYVPQYTTTTKYTPDTERKAIAIWVRNGDYSRDYNFRFTTTAGTTYLAAVRTPASTYPGKLDTSGIPVPKVNMPSETPADTFANRLNKALAQFNSEMAAYNKQVADSTNGYNSAVTQWLGTASAAIQPEQIAIQLTDQIRSKAGLTAQQVQRDGSYIFITDAANVKTGECVAVADTYLKAVVNDVAKPDDLIPKHFFGKTVKVRSQKSTGKDAYYLVAEAKDGQSGLYGDVIWRETAGVQTQPTKVFCVGTIANGTLFIASDPASLETAAGITGVPRFVGSQVGDQVSIPVPNFLKKGISYMGVFQDRLLIGTGSTVFASRPGDYFNWFRQSVLSVSDNDPVEMYALGSEDDTIYWDTTFDRNHVMFGRKYQYIISGRSLLTPNNPNIQIMSAVEDAVQAEPQASGNLVFYGKDIISKGSLHQMQVGATTDSAESYECSQQLDRYIKGKPCQILCNQSPYVVLLRTTEKYNGFYVYTYLDSMQGGQRMFDSWSTWEWDEKLGYCAGISKYQGEILCYTLRTHNNWMGMVCDRFTFDTELSDYPYLDSWRPMKDWQANNQDLVPSQFPKRLSVAYTVAHTYYFMGSPYENLDNNMPGWESDINSLIIGVNYPAYFTPTSPYLRDKNDKAILNGRLTISRLNVAVSDTGALDGQLDLGDRQIDLPGFSGRILTRLGNFVGRQPIVETSVIMPIYKEIREYKLKLMARDWLPLTVTGLEWVGQWFSRVRRV
Physico‐chemical
properties
protein length:875 AA
molecular weight: 97513,93210 Da
isoelectric point:6,99554
aromaticity:0,11429
hydropathy:-0,31337

Domains

Domains [InterPro]
IPR058003
TTP
1–875
IPR058003
DC_0058
STR
1–875
DC_0058
Coil
Unmapped
230–250
Coil
QQM15480.1
1 875
Architecture
STR
STR 1-875
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQM15480.1
1 875
Domain Start End Length (AA) Confidence
N-terminal 1 159 159 0,8951
Central domain 160 358 200 0,4483
C-terminal 359 875 516 0,2008
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-159
Central
160-358
C-terminal
359-875

Taxonomy

  Name Taxonomy ID Lineage
Phage Kosakonia virus Kc318
[NCBI] 		2797327 Uroviricota > Caudoviricetes > Autographivirales > Melnykvirinae > Cronosvirus
Host Kosakonia cowanii
[NCBI] 		208223 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQM15480.1 [NCBI]
Genbank nucleotide accession
MW250276 [NCBI]
CDS location
range 24634 -> 27261
strand +
CDS
ATGGCTAAAGTTGGCGGAAGCTACGACTCAGTTGTGCTCGGCGTGAGCCAGCAGACCCCGCAAGACCGCCGCTCTGGTCAGATGTGGGAACAAGTTAACATGGTGTCTGACCCGGTACAGGGCTTGACTCGCCGACACGGTTCCGTGTTTGAAGCGAAGCAAGACCTCAAGGCGGGCACCGTCAACACTAACTGGCTGCGGGAAGCGGCGGTTAAATTCAAGGTGCGTCCGTTCTCTATCGGCGGCATCGACTACGACTTAATTTACTCAAACGAGTACGTCCGGGGCAACATCACCGAGGTTCTCCCGGTGTACTGCTACGACAAGACGAACAAGAAGTTCATCCCTGTCAAAGGCTCTGGTGACGTGTGGGGTGCTCTGGTGGCGAATGGCGCTTCGGCGGTGGTCAACATCGGCTCGTACCTGTTCCTGTCTGCGAAGGGTTATGTCCCGCAGTATACGACTACCACAAAGTATACGCCGGACACCGAGCGCAAGGCGATTGCCATCTGGGTTCGAAACGGCGACTACAGCCGAGACTACAACTTCCGATTCACCACAACGGCAGGCACCACCTACCTGGCAGCAGTTCGCACTCCTGCGAGCACCTACCCTGGTAAGCTGGACACCTCCGGTATCCCGGTGCCGAAGGTTAACATGCCCTCGGAAACGCCAGCGGATACCTTTGCCAACCGCCTGAACAAAGCGCTTGCTCAGTTCAACAGCGAAATGGCAGCGTACAACAAGCAGGTAGCTGACTCAACCAACGGGTACAACTCGGCGGTGACTCAGTGGCTTGGTACGGCATCGGCGGCTATCCAGCCGGAGCAGATTGCAATACAGCTCACTGACCAGATTCGCTCTAAGGCGGGCCTGACAGCGCAGCAGGTTCAGCGTGACGGCTCCTACATCTTCATCACGGATGCAGCCAACGTTAAAACAGGTGAGTGTGTGGCGGTAGCGGACACCTACCTGAAAGCAGTGGTTAACGACGTGGCTAAGCCTGACGACCTCATCCCTAAGCACTTCTTCGGGAAGACGGTCAAGGTGCGCTCGCAGAAGTCCACGGGTAAGGACGCATACTACCTGGTGGCAGAGGCGAAGGATGGACAGAGTGGCCTGTACGGGGATGTTATCTGGCGTGAGACGGCAGGTGTCCAGACGCAGCCAACGAAGGTGTTCTGCGTAGGAACCATCGCCAACGGCACGTTATTCATCGCGTCTGACCCGGCATCGCTGGAGACGGCGGCGGGCATTACTGGCGTACCGCGATTCGTTGGCAGCCAGGTGGGTGACCAGGTTTCTATCCCGGTGCCGAACTTCCTCAAGAAGGGCATCAGCTACATGGGCGTGTTCCAGGACAGGCTCCTGATTGGCACAGGCTCCACGGTGTTCGCCAGCCGACCGGGGGATTACTTCAACTGGTTCCGACAGTCGGTGCTGAGCGTATCCGACAACGACCCGGTGGAAATGTACGCCCTCGGCTCCGAAGACGACACGATTTATTGGGACACCACGTTTGACCGTAACCACGTTATGTTCGGACGCAAGTACCAGTACATCATCAGTGGGCGCTCTCTGCTTACGCCTAACAACCCCAACATCCAGATTATGTCTGCGGTGGAGGATGCTGTTCAGGCTGAGCCGCAGGCCTCTGGTAACCTCGTCTTCTACGGCAAGGACATTATCAGCAAAGGCTCTCTGCACCAGATGCAGGTGGGCGCTACGACGGACTCTGCGGAATCGTATGAGTGCTCGCAGCAGCTCGACCGCTACATCAAGGGCAAGCCGTGCCAAATCCTGTGCAACCAGTCACCTTACGTCGTGCTTCTCCGCACCACTGAGAAGTATAACGGGTTCTACGTCTACACCTACCTGGATTCAATGCAGGGTGGTCAGCGTATGTTCGATAGCTGGTCAACGTGGGAATGGGACGAGAAGCTGGGCTACTGTGCTGGCATTTCCAAGTACCAGGGCGAGATTCTCTGCTACACGCTGCGTACCCACAATAACTGGATGGGTATGGTCTGCGACCGCTTTACCTTCGACACGGAACTGAGCGATTACCCGTATCTGGATTCGTGGCGACCCATGAAAGACTGGCAAGCCAACAATCAAGACCTGGTGCCTTCGCAGTTCCCGAAACGGTTGAGCGTGGCGTACACTGTGGCGCACACCTATTACTTCATGGGTTCGCCCTACGAGAATCTGGACAACAACATGCCGGGCTGGGAATCGGATATCAACAGCCTCATCATCGGGGTTAACTATCCGGCCTACTTCACGCCAACGTCGCCTTACCTCCGGGATAAGAACGACAAGGCAATCCTGAATGGACGCCTGACGATTAGCCGTCTCAACGTCGCGGTGAGTGACACCGGGGCGCTGGATGGACAGCTCGACCTGGGCGACCGTCAGATTGACCTGCCGGGGTTCAGTGGTCGAATCTTGACCCGGTTGGGTAACTTCGTGGGCCGTCAGCCGATTGTGGAAACGTCGGTAATCATGCCGATTTACAAGGAGATTCGGGAATACAAACTTAAACTAATGGCGCGAGATTGGCTACCCTTGACTGTAACAGGTCTGGAGTGGGTAGGCCAATGGTTCAGCCGTGTACGGAGGGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6f78eee09613addb01af892b5d9e15e64cf2cf71905ebf51ad41783b2823d191
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2915
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Viruses That Lyse Plant and Human Strains of Kosakonia cowanii Petrzik,K., Brazdova,S. and Krawczyk,K. 2021 — GenBank