Protein

View in Explore
Genbank accession
ALY06965.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSWAETYKVNSDLQGEPLNFLSYLQDIKLNGLDSYVLFIGNARIWEELYLNSLYLFSDRGIRETVYTAFSETDIDNLFNKSTKLGEQLNAFYRTDIFSLGNADNVVKEMTIEHYNSLEEKFKAGYDRYVTREQEKSTIGAWFNSTFSLDNTDLENLTTIEEILANVEATNAILNNSNAIVALTMCKSSMDAVVASSNAMDLLGQYILRVTTESPVIRAILKNNVIRDAIINSDEAMTQISSNENSVMEIFNDLEATKVLVQNQNSINKILTNNVTVEKIIPNLLEMKYNLQTSLNYINTIKSNIASGKGQIMAITYNEEIFPILKNAVKNYDGMETTRNISQRDIEEKIKISDAILESSIAMATFANNSIIVNKVGDRVGIIESIFSKTVSLNAFMKSTTAINILVNKTTAFTKIANNSTAFNAMLTISENNVTIANNTTAMGIIANNAQAMSTVANNDTSISVFVNNTTAMGIIANSSTAMTKITLTGLALNRMVKSNTAKSILISKNSTLQTYKNNIQNTIQGSTAYFRTITGFADADDNPPQTINSTYVGITYCYGYKGNSYYGIVYHGYNTSIEAGRGNGYKDETKKFITLGGARYDQSGDGYFTYAMYQAI
Physico‐chemical
properties
protein length:616 AA
molecular weight: 68238,14030 Da
isoelectric point:5,05488
aromaticity:0,08929
hydropathy:-0,17078

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage CDSH1
[NCBI] 		1755693 Uroviricota > Caudoviricetes > Leicestervirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALY06965.1 [NCBI]
Genbank nucleotide accession
KU057941.1 [NCBI]
CDS location
range 22304 -> 24154
strand +
CDS
ATGAGTTGGGCGGAGACATACAAAGTGAATAGTGACTTGCAAGGCGAGCCACTAAATTTTTTAAGTTATTTGCAAGACATAAAACTAAATGGATTAGATAGTTATGTGCTGTTTATTGGAAATGCTAGGATATGGGAAGAATTATATTTAAATAGTTTATATTTATTTTCTGATAGAGGAATAAGAGAAACAGTTTACACAGCTTTTTCAGAAACTGATATTGATAATTTATTTAATAAAAGCACTAAGCTAGGGGAACAATTAAATGCCTTTTATAGAACAGATATATTTAGCTTAGGAAATGCTGATAATGTAGTAAAAGAAATGACTATAGAGCATTATAATTCATTAGAGGAAAAATTTAAAGCAGGGTATGATAGATATGTTACAAGAGAACAAGAAAAGTCAACTATAGGAGCATGGTTTAATTCTACTTTTAGCTTAGATAATACTGATTTAGAAAATCTTACAACTATAGAAGAAATATTAGCAAATGTGGAAGCTACTAATGCAATACTTAATAATAGTAATGCAATAGTAGCTTTAACTATGTGTAAATCAAGCATGGACGCAGTTGTAGCAAGTTCAAATGCTATGGATTTATTAGGTCAATATATTTTAAGAGTTACAACAGAGTCACCAGTCATTAGAGCAATTTTAAAAAATAATGTGATTAGGGATGCGATTATAAATAGTGATGAAGCTATGACACAAATTTCAAGTAACGAAAACTCCGTAATGGAAATATTTAATGACTTAGAAGCTACAAAAGTATTAGTGCAAAACCAAAATAGCATAAATAAAATATTAACTAATAATGTTACTGTTGAAAAAATAATCCCTAATTTATTAGAAATGAAGTATAATTTACAAACTTCTTTAAATTATATAAATACAATAAAATCAAATATTGCTTCTGGTAAAGGTCAAATTATGGCAATAACTTATAATGAAGAAATATTCCCGATTTTAAAAAATGCAGTAAAAAATTATGATGGTATGGAAACCACACGTAATATATCACAACGAGATATTGAGGAAAAAATAAAAATTTCGGATGCAATTTTAGAAAGTTCAATCGCAATGGCAACTTTTGCAAATAATTCTATTATAGTAAATAAAGTTGGTGACCGAGTGGGAATTATAGAAAGTATTTTCAGTAAAACAGTGTCATTAAATGCTTTTATGAAAAGTACAACAGCTATAAATATTTTAGTAAATAAAACTACTGCTTTTACTAAGATAGCAAATAACTCTACTGCTTTCAATGCTATGCTCACTATTTCAGAAAATAACGTTACTATTGCAAATAATACAACAGCAATGGGCATAATTGCAAATAACGCACAAGCTATGTCGACAGTTGCAAATAACGATACGTCTATAAGTGTTTTTGTAAATAATACAACAGCAATGGGCATAATTGCAAATAGCTCAACGGCTATGACCAAAATAACACTTACAGGACTTGCACTTAACAGAATGGTTAAAAGTAATACAGCTAAAAGCATATTAATTAGCAAAAATTCAACTTTACAAACTTACAAAAATAATATACAGAACACAATACAAGGAAGTACTGCTTATTTTAGAACTATCACAGGCTTTGCGGATGCTGATGATAACCCACCGCAAACTATTAATAGTACTTATGTAGGCATAACTTATTGTTATGGATATAAAGGTAATAGTTATTATGGAATTGTGTATCATGGCTACAATACAAGTATAGAAGCAGGCAGAGGAAATGGCTATAAAGATGAAACCAAAAAGTTTATAACATTAGGCGGGGCTAGATATGACCAAAGCGGAGACGGTTATTTTACTTACGCAATGTATCAAGCAATTTAA

Genome Context

Genome Context

Tertiary structure

1 / 2
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Establishment of a human epithelial cell model for assessing the efficacy of bacteriophage therapy in the treatment of Clostridium difficile infection Shan,J., Thanki,A.M., Ramachandran,A., Vukusic,F.B.I., Barylski,J., Millard,A., Nale,J., Hargreaves,K. and Clokie,M.R.J. 2020-04-28 — GenBank